RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 SNX13Q9Y5W8 968 aa17.65■□□□□ 0.42
COL9A3-202ENST00000452372 SH3D21A4FU49 640 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 MT-ATP6P00846 226 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 PSMB1P20618 241 aaKnown RBP17.64■□□□□ 0.41
COL9A3-202ENST00000452372 CCKARP32238 428 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 IFNA8P32881 189 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 RBM34P42696 430 aaKnown RBP17.64■□□□□ 0.41
COL9A3-202ENST00000452372 IST1P53990 364 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 RIPPLY3P57055 190 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 ST3GAL3Q11203 375 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 DAZAP2Q15038 168 aaPredicted RBP17.64■□□□□ 0.41
COL9A3-202ENST00000452372 P2RY6Q15077 328 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 Q6ZT83 130 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 CREB3L2Q70SY1 520 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.64■□□□□ 0.41
COL9A3-202ENST00000452372 KDM8Q8N371 416 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 SCAIQ8N9R8 606 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 WFIKKN1Q96NZ8 548 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 OXGR1Q96P68 337 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 MOGAT1Q96PD6 335 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 HDHD5Q9BXW7 423 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 TAS2R1Q9NYW7 299 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 C6orf203Q9P0P8 240 aaPredicted RBP17.64■□□□□ 0.41
COL9A3-202ENST00000452372 GPR52Q9Y2T5 361 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 VPS13CQ709C8 3753 aa17.64■□□□□ 0.41
COL9A3-202ENST00000452372 LOC102725191A0A1B0GVB3 256 aa17.63■□□□□ 0.41
COL9A3-202ENST00000452372 LRRN3E7EW58 273 aa17.63■□□□□ 0.41
COL9A3-202ENST00000452372 ARPC2O15144 300 aa17.63■□□□□ 0.41
COL9A3-202ENST00000452372 UBOX5O94941 541 aa17.63■□□□□ 0.41
COL9A3-202ENST00000452372 ADAP00813 363 aa17.63■□□□□ 0.41
COL9A3-202ENST00000452372 CBLP22681 906 aa17.63■□□□□ 0.41
COL9A3-202ENST00000452372 SFRP5Q5T4F7 317 aa17.63■□□□□ 0.41
COL9A3-202ENST00000452372 FBXW9Q5XUX1 488 aa17.63■□□□□ 0.41
COL9A3-202ENST00000452372 CXorf67Q86X51 503 aaPredicted RBP17.63■□□□□ 0.41
COL9A3-202ENST00000452372 EPHX4Q8IUS5 362 aa17.63■□□□□ 0.41
COL9A3-202ENST00000452372 C10orf53Q8N6V4 93 aa17.63■□□□□ 0.41
COL9A3-202ENST00000452372 NSMCE2Q96MF7 247 aa17.63■□□□□ 0.41
COL9A3-202ENST00000452372 HS6ST2Q96MM7 605 aa17.63■□□□□ 0.41
COL9A3-202ENST00000452372 ZNF385AQ96PM9 386 aaKnown RBP17.63■□□□□ 0.41
COL9A3-202ENST00000452372 ASPNQ9BXN1 380 aa17.63■□□□□ 0.41
COL9A3-202ENST00000452372 OR10A4Q9H209 315 aa17.63■□□□□ 0.41
COL9A3-202ENST00000452372 MEPEQ9NQ76 525 aaPredicted RBP17.63■□□□□ 0.41
COL9A3-202ENST00000452372 MRPL39Q9NYK5 338 aaKnown RBP17.63■□□□□ 0.41
COL9A3-202ENST00000452372 B3GAT1Q9P2W7 334 aa17.63■□□□□ 0.41
COL9A3-202ENST00000452372 TESMINQ9Y4I5 508 aa17.63■□□□□ 0.41
COL9A3-202ENST00000452372 MS4A18H0YCH9 400 aa17.62■□□□□ 0.41
COL9A3-202ENST00000452372 FFAR1O14842 300 aa17.62■□□□□ 0.41
COL9A3-202ENST00000452372 IGF2P01344 180 aa17.62■□□□□ 0.41
COL9A3-202ENST00000452372 PPP3CBP16298 524 aa17.62■□□□□ 0.41
COL9A3-202ENST00000452372 YAP1P46937 504 aaKnown RBP17.62■□□□□ 0.41
COL9A3-202ENST00000452372 ART1P52961 327 aa17.62■□□□□ 0.41
COL9A3-202ENST00000452372 ITGADQ13349 1161 aa17.62■□□□□ 0.41
COL9A3-202ENST00000452372 ZNF74Q16587 644 aa17.62■□□□□ 0.41
COL9A3-202ENST00000452372 MS4A18Q3C1V0 323 aa17.62■□□□□ 0.41
COL9A3-202ENST00000452372 ANKRD34AQ69YU3 496 aa17.62■□□□□ 0.41
COL9A3-202ENST00000452372 CASP12Q6UXS9 341 aa17.62■□□□□ 0.41
COL9A3-202ENST00000452372 AAED1Q7RTV5 226 aa17.62■□□□□ 0.41
COL9A3-202ENST00000452372 TSEN54Q7Z6J9 526 aaKnown RBP17.62■□□□□ 0.41
COL9A3-202ENST00000452372 OFCC1Q8IZS5 231 aa17.62■□□□□ 0.41
COL9A3-202ENST00000452372 TMEM255BQ8WV15 326 aa17.62■□□□□ 0.41
COL9A3-202ENST00000452372 TMEM239Q8WW34 195 aa17.62■□□□□ 0.41
COL9A3-202ENST00000452372 RASSF1Q9NS23 344 aa17.62■□□□□ 0.41
COL9A3-202ENST00000452372 PRPF19Q9UMS4 504 aaKnown RBP17.62■□□□□ 0.41
COL9A3-202ENST00000452372 NIPBLQ6KC79 2804 aaeCLIP17.62■□□□□ 0.41
COL9A3-202ENST00000452372 ALPK2Q86TB3 2170 aa17.62■□□□□ 0.41
COL9A3-202ENST00000452372 J3KTA2 159 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 KPNA4O00629 521 aaPredicted RBP17.61■□□□□ 0.41
COL9A3-202ENST00000452372 PRSS23O95084 383 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 CH25HO95992 272 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 IGHV3-9P01782 118 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 MT-ND1P03886 318 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 NQO1P15559 274 aaKnown RBP17.61■□□□□ 0.41
COL9A3-202ENST00000452372 ZNF43P17038 809 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 UGT2B15P54855 530 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 PMS2P3Q13401 168 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 C22orf34Q6ZV56 151 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 UBE2J2Q8N2K1 259 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 FAM86B1Q8N7N1 296 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 STEAP2Q8NFT2 490 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 OR5J2Q8NH18 312 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 PYURFQ96I23 114 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 C7orf34Q96L11 122 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 MED18Q9BUE0 208 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 FNDC11Q9BVV2 318 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 FKRPQ9H9S5 495 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 NANSQ9NR45 359 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 ACTR3BQ9P1U1 418 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 ENPP4Q9Y6X5 453 aa17.61■□□□□ 0.41
COL9A3-202ENST00000452372 PRR14LQ5THK1 2151 aa17.6■□□□□ 0.41
COL9A3-202ENST00000452372 A6NNC1 897 aa17.6■□□□□ 0.41
COL9A3-202ENST00000452372 PLPP3O14495 311 aa17.6■□□□□ 0.41
COL9A3-202ENST00000452372 CASKO14936 926 aa17.6■□□□□ 0.41
COL9A3-202ENST00000452372 C1DQ13901 141 aaKnown RBP17.6■□□□□ 0.41
COL9A3-202ENST00000452372 CYP4Z1Q86W10 505 aa17.6■□□□□ 0.41
COL9A3-202ENST00000452372 KISS1RQ969F8 398 aaPredicted RBP17.6■□□□□ 0.41
COL9A3-202ENST00000452372 USB1Q9BQ65 265 aaKnown RBP17.6■□□□□ 0.41
COL9A3-202ENST00000452372 POLDIP3Q9BY77 421 aaKnown RBP17.6■□□□□ 0.41
COL9A3-202ENST00000452372 ACTR6Q9GZN1 396 aa17.6■□□□□ 0.41
COL9A3-202ENST00000452372 CXXC4Q9H2H0 198 aa17.6■□□□□ 0.41
COL9A3-202ENST00000452372 MAN2C1Q9NTJ4 1040 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms