RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 VRK2Q86Y07 508 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 KMT5CQ86Y97 462 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 BAP18Q8IXM2 172 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 C9orf40Q8IXQ3 194 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 OR4N4Q8N0Y3 316 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 ZFP82Q8N141 532 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 HIST3H2BBQ8N257 126 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 Q8N402 240 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 PGBD5Q8N414 524 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 D2HGDHQ8N465 521 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 ACBD7Q8N6N7 88 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 LRRC52Q8N7C0 313 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 BMPERQ8N8U9 685 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 GPR26Q8NDV2 337 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 ATP6V1C2Q8NEY4 427 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 OR8J3Q8NGG0 315 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 OR2T35Q8NGX2 323 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 OR2G2Q8NGZ5 317 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 OR56B4Q8NH76 319 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 M1APQ8TC57 530 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 GNPDA2Q8TDQ7 276 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 GRHL3Q8TE85 626 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 C16orf78Q8WTQ4 265 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 PIH1D2Q8WWB5 315 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 GHSRQ92847 366 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 PNPLA2Q96AD5 504 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 FAF2Q96CS3 445 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 C14orf79Q96F83 325 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 LINGO1Q96FE5 620 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 ELMOD3Q96FG2 381 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 OTUB1Q96FW1 271 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 C5orf34Q96MH7 638 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 GPR78Q96P69 363 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 ATP6V0BQ99437 205 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 DDOQ99489 341 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 VAT1Q99536 393 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 RBBP8Q99708 897 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 HSD17B14Q9BPX1 270 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 NAA11Q9BSU3 229 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 PHF7Q9BWX1 381 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 PLA2G12BQ9BX93 195 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 TEX12Q9BXU0 123 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 RAB34Q9BZG1 259 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 CDCP1Q9H5V8 836 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 TASP1Q9H6P5 420 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 ANKRA2Q9H9E1 313 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 LMAN1LQ9HAT1 526 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 TPT1P8Q9HAU6 139 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 PLEKHA2Q9HB19 425 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 APOBEC3GQ9HC16 384 aaKnown RBP3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 RAB20Q9NX57 234 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 GAR1Q9NY12 217 aaKnown RBP3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 PLEK2Q9NYT0 353 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 PLA2G3Q9NZ20 509 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 SPG21Q9NZD8 308 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 MGAT4CQ9UBM8 478 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 TBC1D29Q9UFV1 150 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 RPH3ALQ9UNE2 315 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 SLC9A8Q9Y2E8 581 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 ZFP30Q9Y2G7 519 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 CLCA3PQ9Y6N3 262 aa3.31□□□□□ -1.88
HMGB3P8-201ENST00000449709 FRMPD3Q5JV73 1810 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 COL5A3P25940 1745 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 A0A096LPI6 279 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 A0A0A6YYC8 382 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 A0A0G2JLL6 359 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 A0A1W2PQL4 384 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 LRIT2A6NDA9 550 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ANKRD61A6NGH8 418 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ZAR1LA6NP61 321 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SNRPGP15A8MWD9 76 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 IDSB3KWA1 339 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 C9J4A7 227 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 LRRN3E7EW58 273 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 H3BNC9 293 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 I3L1I5 382 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 TLR4O00206 839 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 LEFTY2O00292 366 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 ZNF593O00488 134 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 CCSO14618 274 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 MDM4O15151 490 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SEPT4O43236 478 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SLC28A2O43868 658 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 FMO6PO60774 539 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 MOSPD3O75425 235 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 CA11O75493 328 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 KHDRBS3O75525 346 aaKnown RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 NFATC1O95644 943 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 MLYCDO95822 493 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SCGB1D1O95968 90 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SERPINA1P01009 418 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 IFNA21P01568 189 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 TCRBP04435 133 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 BCHEP06276 602 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SNRNP70P08621 437 aaKnown RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 IGFBP1P08833 259 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 SNRPCP09234 159 aaKnown RBP3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 CLTBP09497 229 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 TSPAN19P0C672 248 aa3.3□□□□□ -1.88
HMGB3P8-201ENST00000449709 TBC1D3HP0C7X1 549 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms