RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 C1QL3Q5VWW1 255 aa10.15□□□□□ -0.78
LINC00539-203ENST00000434601 RAET1LQ5VY80 246 aa10.15□□□□□ -0.78
LINC00539-203ENST00000434601 SLC25A25Q6KCM7 469 aa10.15□□□□□ -0.78
LINC00539-203ENST00000434601 NANOGNBQ7Z5D8 188 aa10.15□□□□□ -0.78
LINC00539-203ENST00000434601 CCDC103Q8IW40 242 aa10.15□□□□□ -0.78
LINC00539-203ENST00000434601 LNX2Q8N448 690 aa10.15□□□□□ -0.78
LINC00539-203ENST00000434601 OR8J1Q8NGP2 316 aa10.15□□□□□ -0.78
LINC00539-203ENST00000434601 OR5M1Q8NGP8 315 aa10.15□□□□□ -0.78
LINC00539-203ENST00000434601 HAS2Q92819 552 aa10.15□□□□□ -0.78
LINC00539-203ENST00000434601 GPX7Q96SL4 187 aaPredicted RBP10.15□□□□□ -0.78
LINC00539-203ENST00000434601 IFT27Q9BW83 186 aa10.15□□□□□ -0.78
LINC00539-203ENST00000434601 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.15□□□□□ -0.78
LINC00539-203ENST00000434601 ASF1BQ9NVP2 202 aa10.15□□□□□ -0.78
LINC00539-203ENST00000434601 TVP23BQ9NYZ1 205 aa10.15□□□□□ -0.78
LINC00539-203ENST00000434601 B4GALT7Q9UBV7 327 aa10.15□□□□□ -0.78
LINC00539-203ENST00000434601 RPH3AQ9Y2J0 694 aaPredicted RBP10.15□□□□□ -0.78
LINC00539-203ENST00000434601 TRIM64A6NGJ6 449 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 H3BML4 177 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 SURF4O15260 269 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 OR2T1O43869 369 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 ZIC3O60481 467 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 FAM20BO75063 409 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 FZD7O75084 574 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 PPP1R3DO95685 299 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 HIST1H2ABP04908 130 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 SP1P08047 785 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 TSPAN19P0C672 248 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 TFPIP10646 304 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 IL11P20809 199 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 CRHBPP24387 322 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 FKBP2P26885 142 aaKnown RBP10.14□□□□□ -0.79
LINC00539-203ENST00000434601 GDF1P27539 372 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 GTF2E2P29084 291 aaKnown RBP10.14□□□□□ -0.79
LINC00539-203ENST00000434601 UQCRC1P31930 480 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 IDUAP35475 653 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 APOFQ13790 326 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 MFSD13AQ14CX5 517 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 TOMM20Q15388 145 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 TMEM201Q5SNT2 666 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 ARHGAP11AQ6P4F7 1023 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 TMEM154Q6P9G4 183 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 IGFL2Q6UWQ7 119 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 HIST3H2AQ7L7L0 130 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 SULF2Q8IWU5 870 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 CISD2Q8N5K1 135 aaKnown RBP10.14□□□□□ -0.79
LINC00539-203ENST00000434601 TCEANCQ8N8B7 351 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 ATP6V1C2Q8NEY4 427 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 BPIFB6Q8NFQ5 453 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 TMEM163Q8TC26 289 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 HIST1H2ACQ93077 130 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 DNAJA3Q96EY1 480 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 SCMH1Q96GD3 660 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 PLEKHA8Q96JA3 519 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 Q96MT0 163 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 IL4I1Q96RQ9 567 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 PIGQQ9BRB3 760 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 ASPNQ9BXN1 380 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 MRPS26Q9BYN8 205 aaKnown RBP10.14□□□□□ -0.79
LINC00539-203ENST00000434601 POTEKPQ9BYX7 375 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 OR2B2Q9GZK3 357 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 ENKD1Q9H0I2 346 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 ZNF703Q9H7S9 590 aaPredicted RBP10.14□□□□□ -0.79
LINC00539-203ENST00000434601 KLHL1Q9NR64 748 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 CLN6Q9NWW5 311 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 ALKBH4Q9NXW9 302 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 ERRFI1Q9UJM3 462 aaPredicted RBP10.14□□□□□ -0.79
LINC00539-203ENST00000434601 CORINQ9Y5Q5 1042 aa10.14□□□□□ -0.79
LINC00539-203ENST00000434601 ABCA12Q86UK0 2595 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 OR2M5A3KFT3 312 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 SH3D21A4FU49 640 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 MCIDASD6RGH6 385 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 FTCDNL1E5RQL4 147 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 KLRC4-KLRK1H3BQV0 150 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 M0R082 166 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 EFNA2O43921 213 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 RNF224P0DH78 156 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 PEPDP12955 493 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 GRPRP30550 384 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 RPL4P36578 427 aaKnown RBP10.13□□□□□ -0.79
LINC00539-203ENST00000434601 AQP2P41181 271 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 CLK1P49759 484 aaKnown RBP10.13□□□□□ -0.79
LINC00539-203ENST00000434601 MEOX1P50221 254 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 TNFSF10P50591 281 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 PER3P56645 1201 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 CSNK2BP67870 215 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 EFNB1P98172 346 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 RPL18Q07020 188 aaKnown RBP10.13□□□□□ -0.79
LINC00539-203ENST00000434601 MYBPHQ13203 477 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 BLMHQ13867 455 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 OR7A5Q15622 319 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 SGCBQ16585 318 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 OCLNQ16625 522 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 SMN1Q16637 294 aaKnown RBP10.13□□□□□ -0.79
LINC00539-203ENST00000434601 ALG10Q5BKT4 473 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 ZNF766Q5HY98 468 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 DPY19L2P2Q6ZN68 376 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 Q6ZS92 163 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 GALNTL5Q7Z4T8 443 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 IGFN1Q86VF2 1251 aa10.13□□□□□ -0.79
LINC00539-203ENST00000434601 SCAIQ8N9R8 606 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms