RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ROPN1BQ9BZX4 212 aaPredicted RBP2.18□□□□□ -2.06
CLK1-204ENST00000432425 ROGDIQ9GZN7 287 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 DNTTIP1Q9H147 329 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 MS4A12Q9NXJ0 267 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 POFUT2Q9Y2G5 429 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 PUS1Q9Y606 427 aaKnown RBP eCLIP2.18□□□□□ -2.06
CLK1-204ENST00000432425 MAD1L1Q9Y6D9 718 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 NINLQ9Y2I6 1382 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 FHOD3Q2V2M9 1422 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 OR6C70A6NIJ9 312 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 COCHO43405 550 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 CABYRO75952 493 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 CIAO1O76071 339 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 NOL4O94818 638 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 PGK1P00558 417 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 STSP08842 583 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 HOXB7P09629 217 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 HIST1H2AGP0C0S8 130 aaPredicted RBP2.18□□□□□ -2.06
CLK1-204ENST00000432425 MSR1P21757 451 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 MSNP26038 577 aaKnown RBP2.18□□□□□ -2.06
CLK1-204ENST00000432425 CD80P33681 288 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 ACVR1BP36896 505 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 SPAM1P38567 509 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 PTGFRP43088 359 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 ATP5J2P56134 94 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 DAOAP59103 153 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 KRTAP10-1P60331 282 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 RAB14P61106 215 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 GLO1Q04760 184 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 CYP24A1Q07973 514 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 PUDPQ08623 228 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 SMARCB1Q12824 385 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 PMS2P3Q13401 168 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 EIF2B1Q14232 305 aaKnown RBP2.18□□□□□ -2.06
CLK1-204ENST00000432425 PDK3Q15120 406 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 MAPK6Q16659 721 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 RGS21Q2M5E4 152 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 HSDL1Q3SXM5 330 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 BEND6Q5SZJ8 279 aaPredicted RBP2.18□□□□□ -2.06
CLK1-204ENST00000432425 LGSNQ5TDP6 509 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 NKAIN2Q5VXU1 208 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 TMIGD1Q6UXZ0 262 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 SYT10Q6XYQ8 523 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 FRA10AC1Q70Z53 315 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 BHLHA15Q7RTS1 189 aaPredicted RBP2.18□□□□□ -2.06
CLK1-204ENST00000432425 SLC22A16Q86VW1 577 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.18□□□□□ -2.06
CLK1-204ENST00000432425 ERI1Q8IV48 349 aaKnown RBP2.18□□□□□ -2.06
CLK1-204ENST00000432425 LRRC75A-AS1Q8N1F1 130 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 OR7G1Q8NGA0 311 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 OR5D13Q8NGL4 314 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 OR5M1Q8NGP8 315 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 GPX8Q8TED1 209 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 EMG1Q92979 244 aaKnown RBP2.18□□□□□ -2.06
CLK1-204ENST00000432425 HIST1H2ACQ93077 130 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 MCUR1Q96AQ8 359 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 RAD51AP1Q96B01 352 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 SLC25A38Q96DW6 304 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 DUS3LQ96G46 650 aaKnown RBP2.18□□□□□ -2.06
CLK1-204ENST00000432425 SENP8Q96LD8 212 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 SLC29A1Q99808 456 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 TUBGCP2Q9BSJ2 902 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 TMEM43Q9BTV4 400 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 CHID1Q9BWS9 393 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 TSSK1BQ9BXA7 367 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 ATG10Q9H0Y0 220 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 WDR76Q9H967 626 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 APMAPQ9HDC9 416 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 EXOSC3Q9NQT5 275 aaKnown RBP2.18□□□□□ -2.06
CLK1-204ENST00000432425 COPS7AQ9UBW8 275 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 SLC7A8Q9UHI5 535 aa2.18□□□□□ -2.06
CLK1-204ENST00000432425 CDC42BPBQ9Y5S2 1711 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 A0A0J9YYE9 177 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 MBLAC1A4D2B0 266 aaPredicted RBP2.17□□□□□ -2.06
CLK1-204ENST00000432425 FBLL1A6NHQ2 334 aaKnown RBP2.17□□□□□ -2.06
CLK1-204ENST00000432425 A8MXQ7 604 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 H0YJX3 145 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 SMLR1H3BR10 107 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 BCKDKO14874 412 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 FCMRO60667 390 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 UPK3AO75631 287 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 BRI3O95415 125 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 IGHV3-23P01764 117 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 TRBC1P01850 177 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 APRTP07741 180 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 CD3GP09693 182 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 PNMA6AP0CW24 399 aaPredicted RBP2.17□□□□□ -2.06
CLK1-204ENST00000432425 PNMTP11086 282 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 NCK1P16333 377 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 CTRB1P17538 263 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 MAGP20916 626 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 CMA1P23946 247 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 HOXA9P31269 272 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 NAMPTP43490 491 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 NSFP46459 744 aaKnown RBP2.17□□□□□ -2.06
CLK1-204ENST00000432425 ARRB1P49407 418 aaPredicted RBP2.17□□□□□ -2.06
CLK1-204ENST00000432425 GNG10P50151 68 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 SEC61GP60059 68 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 RAB11AP62491 216 aa2.17□□□□□ -2.06
CLK1-204ENST00000432425 RPL23AP62750 156 aaKnown RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms