RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 OR8G3PP0DMU2 310 aa12.77□□□□□ -0.37
RPL28-202ENST00000426763 IFNGR1P15260 489 aa12.77□□□□□ -0.37
RPL28-202ENST00000426763 CEBPGP53567 150 aa12.77□□□□□ -0.37
RPL28-202ENST00000426763 DND1Q8IYX4 353 aaKnown RBP12.77□□□□□ -0.37
RPL28-202ENST00000426763 DEFB124Q8NES8 71 aa12.77□□□□□ -0.37
RPL28-202ENST00000426763 PAPOLGQ9BWT3 736 aaKnown RBP12.77□□□□□ -0.37
RPL28-202ENST00000426763 ICOSLGO75144 302 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 H2AFB2P0C5Z0 115 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 C21orf33P30042 268 aaPredicted RBP12.76□□□□□ -0.37
RPL28-202ENST00000426763 EMX1Q04741 257 aaPredicted RBP12.76□□□□□ -0.37
RPL28-202ENST00000426763 SLC10A1Q14973 349 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 VASH1Q7L8A9 365 aaPredicted RBP12.76□□□□□ -0.37
RPL28-202ENST00000426763 ABI3BPQ7Z7G0 1075 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 TMEM102Q8N9M5 508 aaPredicted RBP12.76□□□□□ -0.37
RPL28-202ENST00000426763 ZNF582Q96NG8 517 aaPredicted RBP12.76□□□□□ -0.37
RPL28-202ENST00000426763 CSF3RQ99062 836 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 SYT4Q9H2B2 425 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 NIPAL2Q9H841 368 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 ENPP5Q9UJA9 477 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 UBE2J1Q9Y385 318 aaPredicted RBP12.76□□□□□ -0.37
RPL28-202ENST00000426763 PRRG2O14669 202 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 OR2J2O76002 312 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 SELENBP1Q13228 472 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 NTRK2Q16620 822 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 DNAJC22Q8N4W6 341 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 OR51E2Q9H255 320 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 AKR7A3O95154 331 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 SFTPBP07988 381 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 LILRA2Q8N149 483 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 OR5M1Q8NGP8 315 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 ST8SIA1Q92185 356 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 EID2BQ96D98 161 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 ZNF845Q96IR2 970 aaPredicted RBP12.76□□□□□ -0.37
RPL28-202ENST00000426763 SYT3Q9BQG1 590 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 BCL2L10Q9HD36 194 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 FBXL3Q9UKT7 428 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 FOCADQ5VW36 1801 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 SNAPC5O75971 98 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 AMY2AP04746 511 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 YES1P07947 543 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 DEFB127Q9H1M4 99 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 SYNPO2LQ9H987 977 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 COQ3Q9NZJ6 369 aa12.76□□□□□ -0.37
RPL28-202ENST00000426763 TMEM212A6NML5 194 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 TRAPPC2LH3BP13 241 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 PAPLNO95428 1278 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 PPIAP62937 165 aaKnown RBP12.75□□□□□ -0.37
RPL28-202ENST00000426763 MFAP5Q13361 173 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 GNMTQ14749 295 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 GALNT11Q8NCW6 608 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 SIMC1Q8NDZ2 872 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 GCDHQ92947 438 aaPredicted RBP12.75□□□□□ -0.37
RPL28-202ENST00000426763 SARAFQ96BY9 339 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 NECAB3Q96P71 396 aaPredicted RBP12.75□□□□□ -0.37
RPL28-202ENST00000426763 NIPSNAP1Q9BPW8 284 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 ZNF350Q9GZX5 532 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 ERVK13-1Q9NX77 482 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 TRIP12Q14669 1992 aaPredicted RBP12.75□□□□□ -0.37
RPL28-202ENST00000426763 DBHP09172 617 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 RNF4P78317 190 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 ADARB1P78563 741 aaKnown RBP12.75□□□□□ -0.37
RPL28-202ENST00000426763 SLC35D3Q5M8T2 416 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 LAIR1Q6GTX8 287 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 PFN4Q8NHR9 129 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 GRPEL2Q8TAA5 225 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 CNRIP1Q96F85 164 aaPredicted RBP12.75□□□□□ -0.37
RPL28-202ENST00000426763 SLC25A37Q9NYZ2 338 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 ZNF195O14628 629 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 HTR1FP30939 366 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 SMN1Q16637 294 aaKnown RBP12.75□□□□□ -0.37
RPL28-202ENST00000426763 RBM45Q8IUH3 476 aaKnown RBP12.75□□□□□ -0.37
RPL28-202ENST00000426763 GDPD1Q8N9F7 314 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 PHOX2BQ99453 314 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 PAQR5Q9NXK6 330 aaPredicted RBP12.75□□□□□ -0.37
RPL28-202ENST00000426763 MRPL15Q9P015 296 aaKnown RBP12.75□□□□□ -0.37
RPL28-202ENST00000426763 PRAMEF27A3QJZ7 478 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 BCAS1O75363 584 aaPredicted RBP12.75□□□□□ -0.37
RPL28-202ENST00000426763 MMP11P24347 488 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 RPL27P61353 136 aaKnown RBP12.75□□□□□ -0.37
RPL28-202ENST00000426763 SRSF5Q13243 272 aaKnown RBP12.75□□□□□ -0.37
RPL28-202ENST00000426763 NKAIN4Q8IVV8 208 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 MAML2Q8IZL2 1156 aaPredicted RBP12.75□□□□□ -0.37
RPL28-202ENST00000426763 POGLUT1Q8NBL1 392 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 SLC7A13Q8TCU3 470 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 UBQLN3Q9H347 655 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 CHST11Q9NPF2 352 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 ASB4Q9Y574 426 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 ABHD16AO95870 558 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 MSL3P1P0C860 447 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 GM2AP17900 193 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 PRKACBP22694 351 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 SPOCK1Q08629 439 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 GPNMBQ14956 572 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 P2RY14Q15391 338 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 NKPD1Q17RQ9 610 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 GLYR1Q49A26 553 aaPredicted RBP12.75□□□□□ -0.37
RPL28-202ENST00000426763 ZNF684Q5T5D7 378 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 COL13A1Q5TAT6 717 aaPredicted RBP12.75□□□□□ -0.37
RPL28-202ENST00000426763 VHLLQ6RSH7 139 aa12.75□□□□□ -0.37
RPL28-202ENST00000426763 DPY19L4Q7Z388 723 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms