RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ALG2Q9H553 416 aa6.76□□□□□ -1.33
HMGB3P1-201ENST00000393368 PLEKHF2Q9H8W4 249 aa6.76□□□□□ -1.33
HMGB3P1-201ENST00000393368 UBTD1Q9HAC8 227 aa6.76□□□□□ -1.33
HMGB3P1-201ENST00000393368 CCM2LQ9NUG4 571 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P1-201ENST00000393368 ADA2Q9NZK5 511 aa6.76□□□□□ -1.33
HMGB3P1-201ENST00000393368 RHCGQ9UBD6 479 aa6.76□□□□□ -1.33
HMGB3P1-201ENST00000393368 EGFL7Q9UHF1 273 aa6.76□□□□□ -1.33
HMGB3P1-201ENST00000393368 ST6GALNAC2Q9UJ37 374 aa6.76□□□□□ -1.33
HMGB3P1-201ENST00000393368 BAG5Q9UL15 447 aa6.76□□□□□ -1.33
HMGB3P1-201ENST00000393368 SNX13Q9Y5W8 968 aa6.76□□□□□ -1.33
HMGB3P1-201ENST00000393368 CIB4A0PJX0 185 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 TRAPPC13A5PLN9 417 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 MS4A18H0YCH9 400 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 PDLIM1O00151 329 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 GPR37O15354 613 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 UPK3AO75631 287 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 CH25HO95992 272 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 NQO1P15559 274 aaKnown RBP6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 GGT1P19440 569 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 TCN1P20061 433 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 PRDX6P30041 224 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 MSX2P35548 267 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 UGT2B15P54855 530 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 PMS2P3Q13401 168 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 P2RY6Q15077 328 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 MS4A18Q3C1V0 323 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 CARD17Q5XLA6 110 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 PAMR1Q6UXH9 720 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 LINC00114Q6XXX2 140 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 H1FNTQ75WM6 255 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 FITM2Q8N6M3 262 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 FAM86B1Q8N7N1 296 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 TMEM255BQ8WV15 326 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 RASSF5Q8WWW0 418 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 NEUROG1Q92886 237 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 FAM162AQ96A26 154 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 HSH2DQ96JZ2 352 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 LRRC37BQ96QE4 947 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 EMC6Q9BV81 110 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 SF3B5Q9BWJ5 86 aaKnown RBP6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 C1QTNF6Q9BXI9 259 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 ASPNQ9BXN1 380 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 AMBRA1Q9C0C7 1298 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 PCDHAC1Q9H158 963 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 SPAG4Q9NPE6 437 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 FANCFQ9NPI8 374 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 MEPEQ9NQ76 525 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 ASB6Q9NWX5 421 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 MED29Q9NX70 200 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 FAM53CQ9NYF3 392 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 NPAP1Q9NZP6 1156 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 ABCD2Q9UBJ2 740 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 UPB1Q9UBR1 384 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 MALT1Q9UDY8 824 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 TAGLN3Q9UI15 199 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 RASD1Q9Y272 281 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 V9GYQ6 96 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 CELSR1Q9NYQ6 3014 aa6.75□□□□□ -1.33
HMGB3P1-201ENST00000393368 ENO4A6NNW6 628 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 C11orf98E9PRG8 122 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 CLOCKO15516 846 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 TRAF3IP2O43734 574 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 OR2T1O43869 369 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 FZD7O75084 574 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 DCTN3O75935 186 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 KRT33AO76009 404 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 SEC14L2O76054 403 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 ATE1O95260 518 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 IFNA14P01570 189 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 PPP3CBP16298 524 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 ZNF43P17038 809 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 FUT1P19526 365 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 AHCYP23526 432 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 ART1P52961 327 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 SELENOWP63302 87 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 TUBA1BP68363 451 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 TUBA4AP68366 448 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 MXRA7P84157 204 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 POU3F1Q03052 451 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 BSPH1Q075Z2 132 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 SPOCK1Q08629 439 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 C1DQ13901 141 aaKnown RBP6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 PPA1Q15181 289 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 GABRA6Q16445 453 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 ZNF74Q16587 644 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 HIKESHIQ53FT3 197 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 BEX5Q5H9J7 111 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 PHYHD1Q5SRE7 291 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 ADAM5Q6NVV9 412 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 TTC33Q6PID6 262 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 C5orf46Q6UWT4 87 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 ZNF704Q6ZNC4 412 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 TUBA1AQ71U36 451 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 CBLL1Q75N03 491 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 SLC46A3Q7Z3Q1 461 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 LURAP1LQ8IV03 231 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 UEVLDQ8IX04 471 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 KBTBD8Q8NFY9 601 aa6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 ZNF837Q96EG3 531 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P1-201ENST00000393368 TXNDC15Q96J42 360 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms