RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 SCGB2A1O75556 95 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 CHRM4P08173 479 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 DBHP09172 617 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 TACR1P25103 407 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 RAD52P43351 418 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 PDLIM5Q96HC4 596 aaKnown RBP11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 SERTAD4Q9NUC0 356 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 KRBOX1C9JBD0 128 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 NXPH3O95157 252 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 CX3CR1P49238 355 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 TSPAN31Q12999 210 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 SERTAD2Q14140 314 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 MPP7Q5T2T1 576 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 SFXN4Q6P4A7 337 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 GFRALQ6UXV0 394 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 TMEM184AQ6ZMB5 413 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 DEFB127Q9H1M4 99 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 RLIMQ9NVW2 624 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 RBFOX1Q9NWB1 397 aaKnown RBP11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 KCND3Q9UK17 655 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 C2orf72A6NCS6 295 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 A8MXE2 369 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 SURF4O15260 269 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 GABARAPO95166 117 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 RAB40ALP0C0E4 278 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 APEX1P27695 318 aaKnown RBP11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 LIPAP38571 399 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 HTR4Q13639 388 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 TAZQ16635 292 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 MRPL21Q7Z2W9 205 aaKnown RBP11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC38A5Q8WUX1 472 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 RAB40AQ8WXH6 277 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 TEX37Q96LM6 180 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 OR10A5Q9H207 317 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 OR10A2Q9H208 303 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 DUSP13Q9UII6 198 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 SOCS6O14544 535 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 KCNK5O95279 499 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC1A3P43003 542 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 WBP2NLQ6ICG8 309 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 OR7E24Q6IFN5 339 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 RPL22L1Q6P5R6 122 aaKnown RBP11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 FBXW12Q6X9E4 464 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC39A11Q8N1S5 342 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 SPIN2AQ99865 258 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 SPIN2BQ9BPZ2 258 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 TCEAL2Q9H3H9 227 aaPredicted RBP11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 OCEL1Q9H607 264 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 CPNE7Q9UBL6 633 aa11.13□□□□□ -0.63
PCDHA9-201ENST00000378122 TMEM82A0PJX8 343 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 TGM6O95932 706 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 PDGFAP04085 211 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 CPMP14384 443 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 JUNBP17275 347 aaPredicted RBP11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 CD79BP40259 229 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 AVPI1Q5T686 147 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 HBMQ6B0K9 141 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 LACC1Q8IV20 430 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 ISG20Q96AZ6 181 aaKnown RBP11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 MBOAT4Q96T53 435 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 PKMYT1Q99640 499 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 RNF32Q9H0A6 362 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 CXCL16Q9H2A7 254 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 C2CD4DB7Z1M9 353 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 MKRN2OSH3BPM6 223 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 PVRP15151 417 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 GJA4P35212 333 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 POLR2HP52434 150 aaKnown RBP11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 RPL23AP62750 156 aaKnown RBP11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 EBPQ15125 230 aaKnown RBP11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 CNN3Q15417 329 aaKnown RBP11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 GGTA1PQ4G0N0 100 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 EXOSC6Q5RKV6 272 aaKnown RBP11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 MOB3CQ70IA8 216 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 FAM57BQ71RH2 274 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 SEC22AQ96IW7 307 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 CALHM2Q9HA72 323 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 CSNK1G1Q9HCP0 422 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 PRAMEF27A3QJZ7 478 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 FAM90A27PA6NNH2 459 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 CBX7O95931 251 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 IGHV3-9P01782 118 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 TCRBP04435 133 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 NME2P22392 152 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 ELAVL4P26378 380 aaKnown RBP11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 PRKAR1BP31321 381 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 PLA2G7Q13093 441 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 CAMK2DQ13557 499 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 PRAMEF9Q5VWM5 478 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 CREB3L2Q70SY1 520 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 HAVCR2Q8TDQ0 301 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 ZNF566Q969W8 418 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 NMNAT2Q9BZQ4 307 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 AMBRA1Q9C0C7 1298 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 PITHD1Q9GZP4 211 aaPredicted RBP11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 KLHL13Q9P2N7 655 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 CLEC2DQ9UHP7 191 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 MAST2Q6P0Q8 1798 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 PRSS38A1L453 326 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 OR8G3PP0DMU2 310 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms