RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 POMT2Q9UKY4 750 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 ERVK-19Q9WJR5 959 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 MRPS33Q9Y291 106 aaKnown RBP23.11■■□□□ 1.29
C9orf40-201ENST00000376854 PRUNE2Q8WUY3 3088 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 BRWD1Q9NSI6 2320 aa23.11■■□□□ 1.29
C9orf40-201ENST00000376854 C4orf47A7E2U8 309 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 BLOC1S5-TXNDC5H3BN57 136 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 GMDSO60547 372 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 PEX14O75381 377 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 SLC22A5O76082 557 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 GPR3P46089 330 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 CCR9P51686 369 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 BTG2P78543 158 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 HHEXQ03014 270 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 CAMK2DQ13557 499 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 FAM69AQ5T7M9 428 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 LINC01590Q5TEZ4 76 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 SERPINA12Q8IW75 414 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 PIAS4Q8N2W9 510 aaPredicted RBP23.1■■□□□ 1.29
C9orf40-201ENST00000376854 C19orf47Q8N9M1 422 aaKnown RBP23.1■■□□□ 1.29
C9orf40-201ENST00000376854 HRASLSQ9HDD0 168 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 DLL4Q9NR61 685 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 PRTFDC1Q9NRG1 225 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 RXFP3Q9NSD7 469 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 MSRAQ9UJ68 235 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 HS3ST3A1Q9Y663 406 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 IGKV1D-42A0A075B6H8 117 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 HPXP02790 462 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 CDKN2AP42771 156 aaKnown RBP23.1■■□□□ 1.29
C9orf40-201ENST00000376854 CLDN12P56749 244 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 OR6C4Q8NGE1 309 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 OR52I2Q8NH67 350 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 Q96M85 177 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 GPX7Q96SL4 187 aaPredicted RBP23.1■■□□□ 1.29
C9orf40-201ENST00000376854 GPR174Q9BXC1 333 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 HEXA-AS1Q9H8Q6 139 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 LIN7BQ9HAP6 207 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 FLVCR2Q9UPI3 526 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 V9GY05 133 aa23.1■■□□□ 1.29
C9orf40-201ENST00000376854 GABARAPH6UMI1 98 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 RABIFP47224 123 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 JAZF1Q86VZ6 243 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 ZNF511Q8NB15 262 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 SLC19A3Q9BZV2 496 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 ECDO95905 644 aaPredicted RBP23.09■■□□□ 1.29
C9orf40-201ENST00000376854 GABRG2P18507 467 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 DNASE1P24855 282 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 AQP2P41181 271 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 GRK6P43250 576 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 IGLV3-21P80748 117 aaPredicted RBP23.09■■□□□ 1.29
C9orf40-201ENST00000376854 COL28A1Q2UY09 1125 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 PRTGQ2VWP7 1150 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 ZNF684Q5T5D7 378 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 ZNF595Q8IYB9 648 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 ELMOD2Q8IZ81 293 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 OR8H3Q8N146 312 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 GATSQ8NAP1 163 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 OR11G2Q8NGC1 345 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 RNF166Q96A37 237 aaPredicted RBP23.09■■□□□ 1.29
C9orf40-201ENST00000376854 TSPAN10Q9H1Z9 355 aaPredicted RBP23.09■■□□□ 1.29
C9orf40-201ENST00000376854 OR10A5Q9H207 317 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 KLHL9Q9P2J3 617 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 SCP2D1Q9UJQ7 156 aa23.09■■□□□ 1.29
C9orf40-201ENST00000376854 ZNF346Q9UL40 294 aaKnown RBP23.09■■□□□ 1.29
C9orf40-201ENST00000376854 A0A087WV48 116 aa23.08■■□□□ 1.29
C9orf40-201ENST00000376854 ELOA3DA6NLF2 546 aaPredicted RBP23.08■■□□□ 1.29
C9orf40-201ENST00000376854 KHNYNO15037 678 aaKnown RBP23.08■■□□□ 1.29
C9orf40-201ENST00000376854 ITGA10O75578 1167 aa23.08■■□□□ 1.29
C9orf40-201ENST00000376854 RPP14O95059 124 aaKnown RBP23.08■■□□□ 1.29
C9orf40-201ENST00000376854 MAOAP21397 527 aa23.08■■□□□ 1.29
C9orf40-201ENST00000376854 ZP1P60852 638 aa23.08■■□□□ 1.29
C9orf40-201ENST00000376854 ELOA3BQ3SY89 546 aa23.08■■□□□ 1.29
C9orf40-201ENST00000376854 TMEM255AQ5JRV8 349 aa23.08■■□□□ 1.29
C9orf40-201ENST00000376854 C10orf53Q8N6V4 93 aa23.08■■□□□ 1.29
C9orf40-201ENST00000376854 ELOA3Q8NG57 546 aa23.08■■□□□ 1.29
C9orf40-201ENST00000376854 HMGB4Q8WW32 186 aa23.08■■□□□ 1.29
C9orf40-201ENST00000376854 TSSK2Q96PF2 358 aa23.08■■□□□ 1.29
C9orf40-201ENST00000376854 CLDN4O14493 209 aa23.08■■□□□ 1.28
C9orf40-201ENST00000376854 AP3S2P59780 193 aa23.08■■□□□ 1.28
C9orf40-201ENST00000376854 C1orf61Q13536 156 aa23.08■■□□□ 1.28
C9orf40-201ENST00000376854 LGALSLQ3ZCW2 172 aaPredicted RBP23.08■■□□□ 1.28
C9orf40-201ENST00000376854 CDH24Q86UP0 819 aa23.08■■□□□ 1.28
C9orf40-201ENST00000376854 EMC3Q9P0I2 261 aa23.08■■□□□ 1.28
C9orf40-201ENST00000376854 CLDN16Q9Y5I7 305 aa23.08■■□□□ 1.28
C9orf40-201ENST00000376854 LRP4O75096 1905 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 KRT33AO76009 404 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 SEMA4FO95754 770 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 PSMB1P20618 241 aaKnown RBP23.07■■□□□ 1.28
C9orf40-201ENST00000376854 EIF2B5Q13144 721 aaKnown RBP23.07■■□□□ 1.28
C9orf40-201ENST00000376854 FAM209AQ5JX71 171 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 SLC6A19Q695T7 634 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 FCAMRQ8WWV6 532 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 SORCS2Q96PQ0 1159 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 A0A1B0GTQ1 180 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 CRYZL1O95825 349 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 OR8G3PP0DMU2 310 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 DRD1P21728 446 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 ZNF81P51508 661 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 ARPC4P59998 168 aa23.07■■□□□ 1.28
C9orf40-201ENST00000376854 MRPS21P82921 87 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms