RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 ARHGAP9Q9BRR9 750 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 KATNB1Q9BVA0 655 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 ZNF416Q9BWM5 594 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 OR8D2Q9GZM6 311 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 NXF5Q9H1B4 397 aaKnown RBP11.72□□□□□ -0.53
GPC3-201ENST00000370818 FN3KQ9H479 309 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 COMMD3Q9UBI1 195 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 COPS3Q9UNS2 423 aa11.72□□□□□ -0.53
GPC3-201ENST00000370818 SEC16AO15027 2179 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 ZC3H12DA2A288 527 aaKnown RBP11.71□□□□□ -0.53
GPC3-201ENST00000370818 EFCAB7A8K855 629 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 DDAH2O95865 285 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 LALBAP00709 142 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 RAB3AP20336 220 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 F8A1P23610 371 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 ZNF81P51508 661 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 HSF2Q03933 536 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 VWA2Q5GFL6 755 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 FNDC7Q5VTL7 733 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 NIPAL3Q6P499 406 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 UBALD2Q8IYN6 164 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 OR9Q1Q8NGQ5 310 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 OTULINQ96BN8 352 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 ZNF501Q96CX3 271 aaPredicted RBP11.71□□□□□ -0.53
GPC3-201ENST00000370818 TNFRSF13CQ96RJ3 184 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 IFT27Q9BW83 186 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 PCDHB16Q9NRJ7 776 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 CMC2Q9NRP2 79 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 SDHAF2Q9NX18 166 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 GLS2Q9UI32 602 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 YARS2Q9Y2Z4 477 aaKnown RBP11.71□□□□□ -0.53
GPC3-201ENST00000370818 UNC13CQ8NB66 2214 aa11.71□□□□□ -0.53
GPC3-201ENST00000370818 MFSD2BA6NFX1 497 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 GNB5O14775 395 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 CXCL3P19876 107 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 PPICP45877 212 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 CAV3P56539 151 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 CSTF1Q05048 431 aaKnown RBP11.71□□□□□ -0.54
GPC3-201ENST00000370818 CRYZQ08257 329 aaKnown RBP11.71□□□□□ -0.54
GPC3-201ENST00000370818 CAMK2DQ13557 499 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 TPBGQ13641 420 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 CD226Q15762 336 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 METAP1DQ6UB28 335 aaPredicted RBP11.71□□□□□ -0.54
GPC3-201ENST00000370818 TMPRSS9Q7Z410 1059 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 OAFQ86UD1 273 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 GPR135Q8IZ08 494 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 FAM71CQ8NEG0 241 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 SLC2A12Q8TD20 617 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 ZNF721Q8TF20 911 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 KISS1RQ969F8 398 aaPredicted RBP11.71□□□□□ -0.54
GPC3-201ENST00000370818 TMEM203Q969S6 136 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 CCDC74AQ96AQ1 378 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 WACQ9BTA9 647 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 NDC1Q9BTX1 674 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 GHITMQ9H3K2 345 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 RERGLQ9H628 205 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 SF3B6Q9Y3B4 125 aaKnown RBP11.71□□□□□ -0.54
GPC3-201ENST00000370818 MAB21L2Q9Y586 359 aa11.71□□□□□ -0.54
GPC3-201ENST00000370818 TCRBV16S1A1N1A0A5B0 115 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 SLC22A23A1A5C7 686 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 HPGDSO60760 199 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 SLC6A1P30531 599 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 ARRB1P49407 418 aaPredicted RBP11.7□□□□□ -0.54
GPC3-201ENST00000370818 EVX1P49640 407 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 POLR2GP62487 172 aaKnown RBP eCLIP11.7□□□□□ -0.54
GPC3-201ENST00000370818 PPP3R1P63098 170 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 BCL2L15Q5TBC7 163 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 PRPF38BQ5VTL8 546 aaKnown RBP11.7□□□□□ -0.54
GPC3-201ENST00000370818 C1orf189Q5VU69 101 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 FCRLBQ6BAA4 426 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 APOOLQ6UXV4 268 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 CHMP1BQ7LBR1 199 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 LAPTM4BQ86VI4 370 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 GID4Q8IVV7 300 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 SLC46A1Q96NT5 459 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 SECISBP2Q96T21 854 aaKnown RBP11.7□□□□□ -0.54
GPC3-201ENST00000370818 SLC6A15Q9H2J7 730 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 ZNF768Q9H5H4 540 aaKnown RBP11.7□□□□□ -0.54
GPC3-201ENST00000370818 ISYNA1Q9NPH2 558 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 FGF21Q9NSA1 209 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 H2AFY2Q9P0M6 372 aaPredicted RBP11.7□□□□□ -0.54
GPC3-201ENST00000370818 PRELID3BQ9Y3B1 194 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 RP1P56715 2156 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 A0A087WUJ7 227 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 C7orf66A4D0T2 115 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 C19orf67A6NJJ6 358 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 IL33O95760 270 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 ANXA3P12429 323 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 FBLP22087 321 aaKnown RBP11.7□□□□□ -0.54
GPC3-201ENST00000370818 RPS25P62851 125 aaKnown RBP11.7□□□□□ -0.54
GPC3-201ENST00000370818 IL18Q14116 193 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 GPR176Q14439 515 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 PLA1AQ53H76 456 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 LYSMD4Q5XG99 296 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 KANSL1Q7Z3B3 1105 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 KMT5CQ86Y97 462 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 GATSQ8NAP1 163 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 OR51G2Q8NGK0 314 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 AP3S1Q92572 193 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 ADIPOR1Q96A54 375 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms