RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 ADAM12O43184 909 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 SH3BP5O60239 455 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 YIF1AO95070 293 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 IGHDP01880 384 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 IL1RNP18510 177 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 BTCP35070 178 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 HSD17B7P56937 341 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 RBX1P62877 108 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 HES5Q5TA89 166 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 ZFP1Q6P2D0 407 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 SHQ1Q6PI26 577 aaKnown RBP0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 WASH2PQ6VEQ5 465 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 TMEM136Q6ZRR5 245 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 FAM47EQ6ZV65 393 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 LPCAT2Q7L5N7 544 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 TMEM25Q86YD3 366 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 EFCAB13Q8IY85 973 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 SYCP3Q8IZU3 236 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 SPANXA2-OT1Q8N9U9 137 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 LPCAT1Q8NF37 534 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 OR13G1Q8NGZ3 307 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 LILRB4Q8NHJ6 448 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 CMTM2Q8TAZ6 248 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 RAPGEF5Q92565 580 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 NEURL3Q96EH8 262 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 ISYNA1Q9NPH2 558 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 P2RX2Q9UBL9 471 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 ZNF639Q9UID6 485 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 AP4B1Q9Y6B7 739 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 TICRRQ7Z2Z1 1910 aa0.04□□□□□ -2.4
RNU6-238P-201ENST00000363313 IGKV1D-43A0A0B4J1Z2 117 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 A4D1N5 150 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 A8MUI8 341 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 C4orf51C9J302 202 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 RP2O75695 350 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 KLK3P07288 261 aaPredicted RBP0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 ANXA4P09525 319 aaPredicted RBP0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 FOLR1P15328 257 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 TCP1P17987 556 aaKnown RBP0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 CALCRP30988 508 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 COPB2P35606 906 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 BDKRB1P46663 353 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 FGF8P55075 233 aaPredicted RBP0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 KIAA1024LP59773 190 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 REG3AQ06141 175 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 HFEQ30201 348 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 DEFB134Q4QY38 66 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 ZNF410Q86VK4 478 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 TPRA1Q86W33 373 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 GRAMD2AQ8IUY3 354 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 SERPINA12Q8IW75 414 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 CCNYQ8ND76 341 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 FIBINQ8TAL6 211 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 NCLNQ969V3 563 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 SLC25A46Q96AG3 418 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 ZBED3Q96IU2 234 aaPredicted RBP0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 NAP1L3Q99457 506 aaPredicted RBP0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 SLC35A5Q9BS91 424 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 ALG12Q9BV10 488 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 SYNDIG1Q9H7V2 258 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 UBE2ZQ9H832 354 aaPredicted RBP0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 SLCO1B3Q9NPD5 702 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 COMMD8Q9NX08 183 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 AIPL1Q9NZN9 384 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 ANAPC7Q9UJX3 599 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 FANCIQ9NVI1 1328 aa0.03□□□□□ -2.4
RNU6-238P-201ENST00000363313 CUX2O14529 1486 aa0.03□□□□□ -2.41
RNU6-238P-201ENST00000363313 LTBP2Q14767 1821 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 TRAV6A0A075B6T7 132 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 A0A0U1RRA0 63 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 RNF222A6NCQ9 220 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 LRRC30A6NM36 301 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 C12orf77C9JDV5 145 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 E7EQL1 145 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 CCER2I3L3R5 266 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 KLHL2O95198 593 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 APCSP02743 223 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 OPN1LWP04000 364 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 LGALS2P05162 132 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 GKN3PP0CG01 181 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 NPR2P20594 1047 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 LEPP41159 167 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 HNRNPFP52597 415 aaKnown RBP0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 FZD2Q14332 565 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 GPRC6AQ5T6X5 926 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 ZFAND6Q6FIF0 208 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 AFTPHQ6ULP2 937 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 OR8H2Q8N162 312 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 NOXO1Q8NFA2 376 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 VN1R2Q8NFZ6 395 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 HTR3CQ8WXA8 447 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 HGDQ93099 445 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 PINX1Q96BK5 328 aaKnown RBP0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 TM4SF18Q96CE8 201 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 EEF2KMTQ96G04 330 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 ITCHQ96J02 903 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 ZSCAN5AQ9BUG6 496 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 PARP12Q9H0J9 701 aaKnown RBP0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 TBK1Q9UHD2 729 aa0.02□□□□□ -2.41
RNU6-238P-201ENST00000363313 ZBED9Q6R2W3 1325 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms