RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 RSPRY1Q96DX4 576 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 HHIPQ96QV1 700 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 MKRN2Q9H000 416 aaKnown RBP10.89□□□□□ -0.67
COL9A1-202ENST00000357250 TUBB1Q9H4B7 451 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 A0A1W2PS29 197 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 TMEM82A0PJX8 343 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 OR2A25A4D2G3 310 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 OR5K3A6NET4 321 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 FAM227AF5H4B4 570 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 TRAPPC2LH3BP13 241 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 HMGA1P17096 107 aaKnown RBP10.89□□□□□ -0.67
COL9A1-202ENST00000357250 HTR2CP28335 458 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 PTPN6P29350 595 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 SERPINA12Q8IW75 414 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 POC1BQ8TC44 478 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 PPA2Q9H2U2 334 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 ACAD8Q9UKU7 415 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 TMEM184BQ9Y519 407 aaPredicted RBP10.89□□□□□ -0.67
COL9A1-202ENST00000357250 HEMK1Q9Y5R4 338 aaPredicted RBP10.89□□□□□ -0.67
COL9A1-202ENST00000357250 B3GALT1Q9Y5Z6 326 aa10.89□□□□□ -0.67
COL9A1-202ENST00000357250 A8MXE2 369 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 BCAT2O15382 392 aaPredicted RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 IGLV3-27P01718 113 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 HLA-AP01891 365 aaKnown RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 MT-ND4P03905 459 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 SRYQ05066 204 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 PGAP1Q75T13 922 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 ZNF546Q86UE3 836 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 TMEM185AQ8NFB2 350 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 RPL3LQ92901 407 aaKnown RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 MALSU1Q96EH3 234 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 SLC6A18Q96N87 628 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 TNFRSF13CQ96RJ3 184 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 TCEAL7Q9BRU2 100 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 PRDM9Q9NQV7 894 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 PPP3CBP16298 524 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 POU3F3P20264 500 aaPredicted RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 GDF1P27539 372 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 CTHP32929 405 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 POLR2IP36954 125 aaKnown RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 CASP3P42574 277 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 SLC6A12P48065 614 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 EPHA4P54764 986 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 GDF7Q7Z4P5 450 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 NRARPQ7Z6K4 114 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 TRAPPC6BQ86SZ2 158 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 OR4K15Q8NH41 348 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 CPT1CQ8TCG5 803 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 SENP5Q96HI0 755 aaPredicted RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 SLC25A21Q9BQT8 299 aaPredicted RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 NAA50Q9GZZ1 169 aaKnown RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 ISYNA1Q9NPH2 558 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 NOX4Q9NPH5 578 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 MYOTQ9UBF9 498 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 RPH3AQ9Y2J0 694 aaPredicted RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 RRAS2P62070 204 aaPredicted RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 RPS25P62851 125 aaKnown RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 GPLD1P80108 840 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 SPOCK1Q08629 439 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 RBM39Q14498 530 aaKnown RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 KRBOX4Q5JUW0 171 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 NDUFAF7Q7L592 441 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 OR6M1Q8NGM8 313 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 SLC25A43Q8WUT9 341 aaPredicted RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 RADILQ96JH8 1075 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 SGCZQ96LD1 299 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 GMPR2Q9P2T1 348 aaKnown RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 COL11A2P13942 1736 aaPredicted RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 ANKRD31Q8N7Z5 1873 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 DOCK3Q8IZD9 2030 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 TNFRSF10AO00220 468 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 ZNF593O00488 134 aaPredicted RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 OR8G3PP0DMU2 310 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 GDNFP39905 211 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 SLC22A24Q8N4F4 322 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 OR1J2Q8NGS2 313 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 NPRL2Q8WTW4 380 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 CMSS1Q9BQ75 279 aaKnown RBP10.88□□□□□ -0.67
COL9A1-202ENST00000357250 HINT2Q9BX68 163 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 TMEM59Q9BXS4 323 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 LIN7BQ9HAP6 207 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 SPHK1Q9NYA1 384 aa10.88□□□□□ -0.67
COL9A1-202ENST00000357250 BRWD3Q6RI45 1802 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 A8MVM7 634 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 GPR171O14626 319 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 TMEM127O75204 238 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 BTG1P62324 171 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 DCDP81605 110 aaKnown RBP10.87□□□□□ -0.67
COL9A1-202ENST00000357250 MRPL58Q14197 206 aaKnown RBP10.87□□□□□ -0.67
COL9A1-202ENST00000357250 PLCXD3Q63HM9 321 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 FAM111BQ6SJ93 734 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 Q6ZNX1 250 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 NLGN4XQ8N0W4 816 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 FAM26EQ8N5C1 309 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 OR52I1Q8NGK6 324 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 MIB2Q96AX9 1013 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 DNAJB11Q9UBS4 358 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 USP22Q9UPT9 525 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 TMEM72A0PK05 275 aa10.87□□□□□ -0.67
COL9A1-202ENST00000357250 ARRDC5A6NEK1 342 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms