RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 CCDC107Q8WV48 283 aa13.72□□□□□ -0.21
TRAF3-202ENST00000351691 BBS4Q96RK4 519 aa13.72□□□□□ -0.21
TRAF3-202ENST00000351691 OR51V1Q9H2C8 321 aa13.72□□□□□ -0.21
TRAF3-202ENST00000351691 IL23AQ9NPF7 189 aa13.72□□□□□ -0.21
TRAF3-202ENST00000351691 NOX4Q9NPH5 578 aa13.72□□□□□ -0.21
TRAF3-202ENST00000351691 SLC7A7Q9UM01 511 aa13.72□□□□□ -0.21
TRAF3-202ENST00000351691 TNFSF18Q9UNG2 199 aa13.72□□□□□ -0.21
TRAF3-202ENST00000351691 NOTCH4Q99466 2003 aa13.72□□□□□ -0.21
TRAF3-202ENST00000351691 LRRK1Q38SD2 2015 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 OR6C68A6NDL8 312 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 EMC8O43402 210 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 SSX5O60225 188 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 PMS2P2O95744 297 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 CRYBA1P05813 215 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 ADCYAP1P18509 176 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 PAX6P26367 422 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 KCNJ3P48549 501 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 FNTBP49356 437 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 PRKAG1P54619 331 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 PRR5P85299 388 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 REEP5Q00765 189 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 SSBP1Q04837 148 aaKnown RBP13.71□□□□□ -0.21
TRAF3-202ENST00000351691 C9orf64Q5T6V5 341 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 C11orf88Q6PI97 169 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 C17orf64Q86WR6 236 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 CBLN2Q8IUK8 224 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 POMGNT2Q8NAT1 580 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 OR4C16Q8NGL9 310 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 LRFN5Q96NI6 719 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 PRSS27Q9BQR3 290 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 TCEAL7Q9BRU2 100 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 DPH1Q9BZG8 443 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 OR51M1Q9H341 326 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 ICAM5Q9UMF0 924 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 PCDHB10Q9UN67 800 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 KCNE3Q9Y6H6 103 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 CHD7Q9P2D1 2997 aa13.71□□□□□ -0.21
TRAF3-202ENST00000351691 TP53BP1Q12888 1972 aaPredicted RBP13.71□□□□□ -0.21
TRAF3-202ENST00000351691 TRAV20A0A0B4J274 112 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 TRBV2A0A0J9YWF9 115 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 PIN1P1O15428 100 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 RLN1P04808 185 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 ADRB3P13945 408 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 ZNF3P17036 446 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 S100PP25815 95 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 NTHL1P78549 312 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 GGTLC2Q14390 218 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 IRF4Q15306 451 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 FNDC3BQ53EP0 1204 aaKnown RBP13.71□□□□□ -0.22
TRAF3-202ENST00000351691 ADAMTSL4Q6UY14 1074 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 TMPRSS11FQ6ZWK6 438 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 UBE3DQ7Z6J8 389 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 PEX11GQ96HA9 241 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 CMSS1Q9BQ75 279 aaKnown RBP13.71□□□□□ -0.22
TRAF3-202ENST00000351691 TMEM138Q9NPI0 162 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 MKL2Q9ULH7 1088 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 ASF1AQ9Y294 204 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 NTNG1Q9Y2I2 539 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 MYO7AQ13402 2215 aa13.71□□□□□ -0.22
TRAF3-202ENST00000351691 K7ESM1 405 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 CEBPBP17676 345 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 MAKP20794 623 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 HCCSP53701 268 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 SLC16A1P53985 500 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 PSMD4P55036 377 aaKnown RBP13.7□□□□□ -0.22
TRAF3-202ENST00000351691 ECH1Q13011 328 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 ELAVL3Q14576 367 aaKnown RBP13.7□□□□□ -0.22
TRAF3-202ENST00000351691 TP53I3Q53FA7 332 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 OR4C11Q6IEV9 310 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 ERN2Q76MJ5 926 aaKnown RBP13.7□□□□□ -0.22
TRAF3-202ENST00000351691 C11orf96Q7Z7L8 435 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 ETFBKMTQ8IXQ9 262 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 OR1S2Q8NGQ3 325 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 OR1J4Q8NGS1 313 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 BADQ92934 168 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 RAB7BQ96AH8 199 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 COX14Q96I36 57 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 SEC11CQ9BY50 192 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 UPB1Q9UBR1 384 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 ZNF443Q9Y2A4 671 aaPredicted RBP13.7□□□□□ -0.22
TRAF3-202ENST00000351691 PRKAB1Q9Y478 270 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 A0A1B0GTI1 187 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 MEX3AA1L020 520 aaKnown RBP13.7□□□□□ -0.22
TRAF3-202ENST00000351691 LRRC72A6NJI9 287 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 XRCC3O43542 346 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 EDNRAP25101 427 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 BDKRB2P30411 391 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 LUMP51884 338 aaPredicted RBP13.7□□□□□ -0.22
TRAF3-202ENST00000351691 RAB5BP61020 215 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 CXADRP78310 365 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 PCGF3Q3KNV8 242 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 EIPR1Q53HC9 387 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 LY6G6FQ5SQ64 297 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 LMNTD1Q8N9Z9 388 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 NXPE3Q969Y0 559 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 SLC25A28Q96A46 364 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 ZG16BQ96DA0 208 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 C16orf58Q96GQ5 468 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 TMEM185BQ9H7F4 350 aa13.7□□□□□ -0.22
TRAF3-202ENST00000351691 SEBOXQ9HB31 216 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms