RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 DXOO77932 396 aaKnown RBP3.73□□□□□ -1.81
MCF2-201ENST00000338585 WDPCPO95876 746 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 MT-ATP6P00846 226 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 P04436 131 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 HIST1H2ABP04908 130 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 CD14P08571 375 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 MRPL3P09001 348 aaKnown RBP3.73□□□□□ -1.81
MCF2-201ENST00000338585 TSPAN19P0C672 248 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 HSMCR30P0CW71 290 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 PRR23D2P0DMB1 279 aaPredicted RBP3.73□□□□□ -1.81
MCF2-201ENST00000338585 HLA-DOBP13765 273 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 HK1P19367 917 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 KLK2P20151 261 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 SLC2A5P22732 501 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 AHCYP23526 432 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 PCSK6P29122 969 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 HTR1FP30939 366 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 SFTPDP35247 375 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 LIPAP38571 399 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 RFC3P40938 356 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 CDKN2AP42771 156 aaKnown RBP3.73□□□□□ -1.81
MCF2-201ENST00000338585 RPS7P62081 194 aaKnown RBP3.73□□□□□ -1.81
MCF2-201ENST00000338585 MYBPHQ13203 477 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 TUBA3CQ13748 450 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 SGCBQ16585 318 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 RSPO4Q2I0M5 234 aaPredicted RBP3.73□□□□□ -1.81
MCF2-201ENST00000338585 SLC25A53Q5H9E4 307 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 SYT6Q5T7P8 510 aaPredicted RBP3.73□□□□□ -1.81
MCF2-201ENST00000338585 OR2G6Q5TZ20 316 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 UBE2UQ5VVX9 321 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 JMJD6Q6NYC1 403 aaPredicted RBP3.73□□□□□ -1.81
MCF2-201ENST00000338585 TUBA3EQ6PEY2 450 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 BORAQ6PGQ7 559 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 IGF2-ASQ6U949 168 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 LYPD4Q6UWN0 246 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 B3GNT6Q6ZMB0 384 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 SLC16A12Q6ZSM3 486 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 HIST3H2AQ7L7L0 130 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 MAMDC2Q7Z304 686 aaPredicted RBP3.73□□□□□ -1.81
MCF2-201ENST00000338585 WDFY1Q8IWB7 410 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 DND1Q8IYX4 353 aaKnown RBP3.73□□□□□ -1.81
MCF2-201ENST00000338585 TMEM99Q8N816 258 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 NPEPL1Q8NDH3 523 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 OR51G2Q8NGK0 314 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 OR5J2Q8NH18 312 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 STK35Q8TDR2 534 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 HIST1H2ACQ93077 130 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 C12orf43Q96C57 262 aaKnown RBP3.73□□□□□ -1.81
MCF2-201ENST00000338585 ISOC1Q96CN7 298 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 TMEM80Q96HE8 168 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 SGCZQ96LD1 299 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 FER1L6-AS2Q96M78 137 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 TSSK2Q96PF2 358 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 GPX7Q96SL4 187 aaPredicted RBP3.73□□□□□ -1.81
MCF2-201ENST00000338585 DDOQ99489 341 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 TUBA1CQ9BQE3 449 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 PTGES2Q9H7Z7 377 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 SACM1LQ9NTJ5 587 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 NDUFA13Q9P0J0 144 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 H2AFY2Q9P0M6 372 aaPredicted RBP3.73□□□□□ -1.81
MCF2-201ENST00000338585 RSL24D1Q9UHA3 163 aaKnown RBP3.73□□□□□ -1.81
MCF2-201ENST00000338585 BAIAP2Q9UQB8 552 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 PCDHGB6Q9Y5F9 930 aa3.73□□□□□ -1.81
MCF2-201ENST00000338585 ANKRD33BA6NCL7 494 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 LIPT2A6NK58 231 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 ZNF814B7Z6K7 855 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 H0YC42 278 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 DCTN6O00399 190 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 DLL1O00548 723 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 PLPP3O14495 311 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 ZNF208O43345 1280 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 AKR7A3O95154 331 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 SNX4O95219 450 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 ATE1O95260 518 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 RAB36O95755 333 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 LIMS3P0CW19 117 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 LIMS4P0CW20 117 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 ZNF3P17036 446 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 DCKP27707 260 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 GSTT1P30711 240 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 IDUAP35475 653 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 TGFBR2P37173 567 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 FOXC1Q12948 553 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 CLN3Q13286 438 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 MELKQ14680 651 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 RTP5Q14D33 572 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 TOMM20Q15388 145 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 MED22Q15528 200 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 OR1C1Q15619 314 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 TIGD6Q17RP2 521 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 TMEM176BQ3YBM2 270 aaPredicted RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 MESTQ5EB52 335 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 RAET1LQ5VY80 246 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 DMRTA1Q5VZB9 504 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 LEG1Q6P5S2 330 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 MEPCEQ7L2J0 689 aaKnown RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 YRDCQ86U90 279 aaKnown RBP3.72□□□□□ -1.81
MCF2-201ENST00000338585 LHFPL3Q86UP9 236 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 GALNT16Q8N428 558 aa3.72□□□□□ -1.81
MCF2-201ENST00000338585 RPL3LQ92901 407 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms