RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 A0A0U1RQK1 487 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 SEMA4FO95754 770 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 FOLR1P15328 257 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 SLC5A12Q1EHB4 618 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 MRPL2Q5T653 305 aaKnown RBP7.11□□□□□ -1.27
SF3B3-201ENST00000302516 TMUB2Q71RG4 321 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 SIAH3Q8IW03 269 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 MDGA1Q8NFP4 955 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 OR2A12Q8NGT7 310 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 OR4Q3Q8NH05 313 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 SLC38A5Q8WUX1 472 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 FAM71F1Q96KD3 344 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-201ENST00000302516 C3orf30Q96M34 536 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 PBX4Q9BYU1 374 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 ELOVL3Q9HB03 270 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 PCDHB10Q9UN67 800 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 GLSO94925 669 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-201ENST00000302516 ZNF26P17031 533 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-201ENST00000302516 HNRNPA2B1P22626 353 aaKnown RBP7.11□□□□□ -1.27
SF3B3-201ENST00000302516 OVCH1Q7RTY7 1134 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 OR6M1Q8NGM8 313 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 CDCA4Q9BXL8 241 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 PCDHGA6Q9Y5G7 932 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 RGPD3A6NKT7 1758 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-201ENST00000302516 RGPD4Q7Z3J3 1758 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 PRAMEF27A3QJZ7 478 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 PDGFAP04085 211 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 SRMP19623 302 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 SERPINA2P20848 420 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 TAGLN2P37802 199 aaKnown RBP7.11□□□□□ -1.27
SF3B3-201ENST00000302516 PRAMEF9Q5VWM5 478 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 HTR3DQ70Z44 454 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 GPR155Q7Z3F1 870 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 L3MBTL4Q8NA19 623 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 OR51L1Q8NGJ5 315 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 LURAP1Q96LR2 239 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 HAPLN2Q9GZV7 340 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 ADAM19Q9H013 955 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 OSGIN1Q9UJX0 560 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 POU2F3Q9UKI9 436 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 SMCHD1A6NHR9 2005 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 SLC9B1P1A6NJY1 282 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 IGHEP01854 428 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 CD1EP15812 388 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 CPEP16870 476 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 OXA1LQ15070 435 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 RPE65Q16518 533 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 FAM162BQ5T6X4 162 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 KCTD11Q693B1 232 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 HMGN2P46Q86SG4 172 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 KATNB1Q9BVA0 655 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 CSNK1G1Q9HCP0 422 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 LHX6Q9UPM6 363 aa7.11□□□□□ -1.27
SF3B3-201ENST00000302516 MT-ATP6P00846 226 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 ITGB2P05107 769 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 FKBP2P26885 142 aaKnown RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 CCR9P51686 369 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 RANP62826 216 aaKnown RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 SLC35A1P78382 337 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 REEP5Q00765 189 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 ACSM1Q08AH1 577 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 EBPQ15125 230 aaKnown RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 OR7A5Q15622 319 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 SLX4IPQ5VYV7 408 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 TMEM151BQ8IW70 566 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 MKXQ8IYA7 352 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 SEMA6DQ8NFY4 1073 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 SFXN2Q96NB2 322 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 HINT2Q9BX68 163 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 STRAPQ9Y3F4 350 aaKnown RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 RHBDD3Q9Y3P4 386 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 CORINQ9Y5Q5 1042 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 C7orf72A4D263 438 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 MT-ND4LP03901 98 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 SPI1P17947 270 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 AADACP22760 399 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 PSMB10P40306 273 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 NOVP48745 357 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 SNU13P55769 128 aaKnown RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 RNLSQ5VYX0 342 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 PRSS35Q8N3Z0 413 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 OR52I1Q8NGK6 324 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 DUSP19Q8WTR2 217 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 SLC46A1Q96NT5 459 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 TMEM221A6NGB7 291 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 ZNF264O43296 627 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 TFAP2AP05549 437 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 ATXN1LP0C7T5 689 aaKnown RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 LRRC26Q2I0M4 334 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 CST9LP1Q5W188 147 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 ALKAL2Q6UX46 152 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 OR10R2Q8NGX6 335 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 ANGPTL6Q8NI99 470 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 ABHD4Q8TB40 342 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 CTDSP2O14595 271 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 DTYMKP23919 212 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 RAB38P57729 211 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 RAB1AP62820 205 aa7.1□□□□□ -1.27
SF3B3-201ENST00000302516 SIM1P81133 766 aaPredicted RBP7.1□□□□□ -1.27
SF3B3-201ENST00000302516 MRPS34P82930 218 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms