RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 TMEM43Q9BTV4 400 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 DOCK2Q92608 1830 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 TRGV5A0A0B4J1U4 118 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 LINC01387J3KSC0 135 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 IGHV3-9P01782 118 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 H2AFB2P0C5Z0 115 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 SRP9P49458 86 aaKnown RBP12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 RAB13P51153 203 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 GPR157Q5UAW9 335 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 BCORP1Q8N888 145 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 OR13C2Q8NGS9 318 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 ASB12Q8WXK4 309 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 HAS2Q92819 552 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 ATOH8Q96SQ7 321 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 TMEM181Q9P2C4 612 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 TIMM10BQ9Y5J6 103 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 AGFG2O95081 481 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 CFHR5Q9BXR6 569 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 NRSN2Q9GZP1 204 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 ESRP2Q9H6T0 727 aaKnown RBP12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 PRELID3BQ9Y3B1 194 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 ARNTLO00327 626 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 OR2J2O76002 312 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 APOA2P02652 100 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 PRKAR1BP31321 381 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 GFERP55789 205 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 PRAMEF9Q5VWM5 478 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 MEX3BQ6ZN04 569 aaKnown RBP12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 SPAG16Q8N0X2 631 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 APOBEC4Q8WW27 367 aaKnown RBP12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 EMG1Q92979 244 aaKnown RBP12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 ANKRD19PQ9H560 264 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 PTTG2Q9NZH5 202 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 SLC23A2Q9UGH3 650 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 POMT2Q9UKY4 750 aa12.53□□□□□ -0.4
PDGFRB-201ENST00000261799 TNFSF11O14788 317 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 TUSC2O75896 110 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 AKR7A3O95154 331 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 CSF1P09603 554 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 FURINP09958 794 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 NFYBP25208 207 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 ELAVL4P26378 380 aaKnown RBP12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 IVDP26440 423 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 ADH6P28332 368 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 CTGFP29279 349 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 WNT4P56705 351 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 FAPQ12884 760 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 ZNF836Q6ZNA1 936 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 CFAP77Q6ZQR2 320 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 CCL4L1Q8NHW4 92 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 SLC39A7Q92504 469 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 BEX2Q9BXY8 128 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 SMOC1Q9H4F8 434 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 BEX1Q9HBH7 125 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 CHST11Q9NPF2 352 aa12.52□□□□□ -0.4
PDGFRB-201ENST00000261799 DLL1O00548 723 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 ARAFP10398 606 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 AQP2P41181 271 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 SLC19A1P41440 591 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 HBA1P69905 142 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 P2RY14Q15391 338 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 RNF220Q5VTB9 566 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 TSPYL5Q86VY4 417 aaPredicted RBP12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 RDH10Q8IZV5 341 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 MUL1Q969V5 352 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 KATNB1Q9BVA0 655 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 BARHL1Q9BZE3 327 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 MOV10Q9HCE1 1003 aaKnown RBP12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 APMAPQ9HDC9 416 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 A4GALTQ9NPC4 353 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 LRIT2A6NDA9 550 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 FBXO45P0C2W1 286 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 MEOX1P50221 254 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 SPOCK1Q08629 439 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 RAB40BQ12829 278 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 MBOAT2Q6ZWT7 520 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 MEX3DQ86XN8 651 aaKnown RBP12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 NICN1Q9BSH3 213 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 CHRNA9Q9UGM1 479 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 PCDHGA5Q9Y5G8 931 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 OR7A17O14581 309 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 RP2O75695 350 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 S100A2P29034 98 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 ETV5P41161 510 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 AKR1C8PQ5T2L2 129 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 FAM69AQ5T7M9 428 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 MFSD12Q6NUT3 480 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 DPY19L2P2Q6ZN68 376 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 FCRLAQ7L513 359 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 C4orf36Q96KX1 117 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 SYNPO2LQ9H987 977 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 CRLF2Q9HC73 371 aa12.52□□□□□ -0.41
PDGFRB-201ENST00000261799 CXorf51AA0A1B0GTR3 108 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 SGCEO43556 437 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 BCAS1O75363 584 aaPredicted RBP12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 TUBG1P23258 451 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 RPL11P62913 178 aaKnown RBP12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 DYRK1AQ13627 763 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 PAGE3Q5JUK9 113 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms