RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Mfsd4b5E9PYY6 479 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Dbx2F8VQH7 377 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Zfp989H3BLB0 661 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Fcer1aP20489 250 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 GhrhrP32082 423 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 S100a11P50543 98 aaKnown RBP17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Foxred1Q3TQB2 487 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Fzd8Q61091 685 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 ShfQ8CG80 238 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr1491Q8VEZ5 319 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr799Q8VGI7 311 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Hrh4Q91ZY2 391 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Gtpbp3Q923K4 492 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Zmynd19Q9CQG3 227 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Slc35a4Q9D321 324 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Slc7a11Q9WTR6 502 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Clec2iQ9WVF9 217 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Slc7a7Q9Z1K8 510 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Spag17Q5S003 2320 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Rpl7a-ps5A0A140T8L3 268 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Zfp619G3X9T2 1161 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 C4bpaP08607 469 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 NelfeP19426 375 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Cdk5r1P61809 307 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Tbx4P70325 552 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Smad5P97454 465 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Fbxo5Q7TSG3 421 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Peli1Q8C669 418 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Lrp11Q8CB67 483 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Nsun3Q8CCT7 348 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Fbxw17Q8CFE8 466 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Nfatc4Q8K120 901 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Ndc1Q8VCB1 673 aaKnown RBP17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Mrgpra5Q91ZC7 304 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Slc25a36Q922G0 311 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Mrm1Q99J25 320 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Rwdd2bQ99M03 290 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Cthrc1Q9D1D6 245 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 UqcrbQ9D855 111 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Unc13cQ8K0T7 2210 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr1234A2AVK5 314 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr653E9PVA0 317 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 5430401F13RikE9Q328 175 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Angpt1O08538 498 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Nkx2-2P42586 273 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 P2rx1P51576 399 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Hoxc4Q08624 264 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Pla2g7Q60963 440 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Pea15Q62048 130 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Dsg1cQ7TSF0 911 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Abhd16bQ80YU0 474 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Plekhm3Q8BM47 761 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 P2ry10bQ8BY68 352 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Dzank1Q8C008 778 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Mtnr1bQ8CIQ6 364 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Tor2aQ8R1J9 321 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Tctn3Q8R2Q6 595 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Mrps23Q8VE22 177 aaKnown RBP17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr516Q8VFZ5 314 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 D6Wsu163eQ91YN0 552 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 NansQ99J77 359 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Prl8a9Q9CQ58 241 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Mgat4cQ9D306 478 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Med11Q9D8C6 117 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Gstk1Q9DCM2 226 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Bpnt1Q9Z0S1 308 aa17.25■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Igkv17-127A0A0G2JDN5 117 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Gm29797A0A140LIA7 188 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr1193A2AV13 318 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Calhm1D3Z291 348 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Slc16a5G5E8K6 468 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Fcn1O70165 334 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Fcgr3P08508 261 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Rps11P62281 158 aaKnown RBP17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 S100gP97816 79 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 P4ha2Q60716 537 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Foxd3Q61060 465 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 CltbQ6IRU5 229 aaKnown RBP17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Spaca9Q7TPM5 168 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Mospd3Q8BGG6 235 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Stfa2l1Q8BWM3 103 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Gpx4Q91XR9 253 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Uckl1Q91YL3 548 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Cdca3Q99M54 266 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Fam69bQ99ML4 431 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Coq5Q9CXI0 327 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Prss52Q9D9M0 321 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr971Q9EQ96 307 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Fer1l5P0DM40 2038 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Tspan6O70401 245 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Il1bP10749 269 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 PlgP20918 812 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Hsd3b3P26150 373 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Prss55Q14BX2 321 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Taar7dQ5QD10 358 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Slc30a8Q8BGG0 367 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Zfp189Q8BKP2 608 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Flrt2Q8BLU0 660 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Tmem222Q8BVA2 208 aa17.24■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 RfesdQ8K2P6 157 aa17.24■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 79.3 ms