RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 NXF5Q9H1B4 397 aaKnown RBP13.32□□□□□ -0.28
SCARB2-216ENST00000639300 ZNF160Q9HCG1 818 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 KCNE3Q9Y6H6 103 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 COL11A2P13942 1736 aaPredicted RBP13.32□□□□□ -0.28
SCARB2-216ENST00000639300 A6NIZ1 184 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 GNRHRP30968 328 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 GDNFP39905 211 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 RAP1BP61224 184 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 RAP1AP62834 184 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 RPS15P62841 145 aaKnown RBP13.32□□□□□ -0.28
SCARB2-216ENST00000639300 CTF1Q16619 201 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 GDPD3Q7L5L3 318 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 OR4M1Q8NGD0 313 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 TOMM40LQ969M1 308 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 KCTD12Q96CX2 325 aaKnown RBP13.32□□□□□ -0.28
SCARB2-216ENST00000639300 ANKRD19PQ9H560 264 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 ZNF576Q9H609 170 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 PCDHB16Q9NRJ7 776 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 ANKRD61A6NGH8 418 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 M0R036 132 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 TNFRSF10CO14798 259 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 BCAT2O15382 392 aaPredicted RBP13.32□□□□□ -0.28
SCARB2-216ENST00000639300 DAP3P51398 398 aaKnown RBP13.32□□□□□ -0.28
SCARB2-216ENST00000639300 CSNK2A1P68400 391 aaPredicted RBP13.32□□□□□ -0.28
SCARB2-216ENST00000639300 RAE1P78406 368 aaKnown RBP13.32□□□□□ -0.28
SCARB2-216ENST00000639300 TBC1D25Q3MII6 688 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 CSNK2A3Q8NEV1 391 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 C17orf50Q8WW18 174 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 ZNF566Q969W8 418 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 LCORQ96JN0 433 aaPredicted RBP13.32□□□□□ -0.28
SCARB2-216ENST00000639300 LINC00615Q96LM1 132 aaPredicted RBP13.32□□□□□ -0.28
SCARB2-216ENST00000639300 STRADBQ9C0K7 418 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 PPIL1Q9Y3C6 166 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 RHBDD3Q9Y3P4 386 aa13.32□□□□□ -0.28
SCARB2-216ENST00000639300 CKAP5Q14008 2032 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 TMEM129A0AVI4 362 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 PTPN6P29350 595 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 TRHRP34981 398 aaPredicted RBP13.31□□□□□ -0.28
SCARB2-216ENST00000639300 KCNAB1Q14722 419 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 TMEM244Q5VVB8 128 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 METAP1DQ6UB28 335 aaPredicted RBP13.31□□□□□ -0.28
SCARB2-216ENST00000639300 KCTD20Q7Z5Y7 419 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 SFXN2Q96NB2 322 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 RPP25Q9BUL9 199 aaKnown RBP13.31□□□□□ -0.28
SCARB2-216ENST00000639300 ST6GALNAC5Q9BVH7 336 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 ZMAT3Q9HA38 289 aaKnown RBP13.31□□□□□ -0.28
SCARB2-216ENST00000639300 RABL2AQ9UBK7 228 aaPredicted RBP13.31□□□□□ -0.28
SCARB2-216ENST00000639300 RABL2BQ9UNT1 228 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 IGHV3-20A0A0C4DH32 117 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 SELENOFO60613 162 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 XAF1Q6GPH4 301 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 FAM198BQ6UWH4 519 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 PRSS45Q7RTY3 260 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 MRGPRX3Q96LB0 322 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 METTL17Q9H7H0 456 aaPredicted RBP13.31□□□□□ -0.28
SCARB2-216ENST00000639300 SLC6A20Q9NP91 592 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 POLHQ9Y253 713 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 XIRP1Q702N8 1843 aaKnown RBP13.31□□□□□ -0.28
SCARB2-216ENST00000639300 KCNE1BA0A087WTH5 132 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 NAP1L6A6NFF2 107 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 HTR3BO95264 441 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 APEHP13798 732 aaKnown RBP13.31□□□□□ -0.28
SCARB2-216ENST00000639300 RPS27P42677 84 aaKnown RBP13.31□□□□□ -0.28
SCARB2-216ENST00000639300 BTG2P78543 158 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 RUNX2Q13950 521 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 MELKQ14680 651 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 TMEM176BQ3YBM2 270 aaPredicted RBP13.31□□□□□ -0.28
SCARB2-216ENST00000639300 NDUFAF7Q7L592 441 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 ACBD4Q8NC06 268 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 OR5H2Q8NGV7 314 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 OPALINQ96PE5 141 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 ULBP3Q9BZM4 244 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 MFFQ9GZY8 342 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 SRCAPQ6ZRS2 3230 aa13.31□□□□□ -0.28
SCARB2-216ENST00000639300 G3V3Y1 287 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 SUSD5O60279 629 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 MTNR1BP49286 362 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 PSPHP78330 225 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 RIN1Q13671 783 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 POU4F3Q15319 338 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 MEP1BQ16820 701 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 ZG16BQ96DA0 208 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 BCL2L10Q9HD36 194 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 KCNN3Q9UGI6 736 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 HIF3AQ9Y2N7 669 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 CIB4A0PJX0 185 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 ZFAND5O76080 213 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 CD1CP29017 333 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 SOX18P35713 384 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 NUDT1P36639 197 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 EFR3AQ14156 821 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 COX15Q7KZN9 410 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 PPP1R3BQ86XI6 285 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 LACC1Q8IV20 430 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 PDZD9Q8IXQ8 264 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 C10orf111Q8N326 155 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 ELSPBP1Q96BH3 223 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 YIPF6Q96EC8 236 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 CSF3RQ99062 836 aa13.3□□□□□ -0.28
SCARB2-216ENST00000639300 FBXO8Q9NRD0 319 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms