RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 AMBRA1Q9C0C7 1298 aa6.74□□□□□ -1.33
TCF4-260ENST00000627685 KAT8Q9H7Z6 458 aaKnown RBP6.74□□□□□ -1.33
TCF4-260ENST00000627685 SAR1AQ9NR31 198 aa6.74□□□□□ -1.33
TCF4-260ENST00000627685 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.74□□□□□ -1.33
TCF4-260ENST00000627685 KLHL28Q9NXS3 571 aa6.74□□□□□ -1.33
TCF4-260ENST00000627685 NPAP1Q9NZP6 1156 aa6.74□□□□□ -1.33
TCF4-260ENST00000627685 C6orf203Q9P0P8 240 aaPredicted RBP6.74□□□□□ -1.33
TCF4-260ENST00000627685 B3GAT1Q9P2W7 334 aa6.74□□□□□ -1.33
TCF4-260ENST00000627685 SEC14L4Q9UDX3 406 aa6.74□□□□□ -1.33
TCF4-260ENST00000627685 PLEKHA6Q9Y2H5 1048 aa6.74□□□□□ -1.33
TCF4-260ENST00000627685 GPR52Q9Y2T5 361 aa6.74□□□□□ -1.33
TCF4-260ENST00000627685 MED12LQ86YW9 2145 aa6.74□□□□□ -1.33
TCF4-260ENST00000627685 PRRC2AP48634 2157 aaKnown RBP6.74□□□□□ -1.33
TCF4-260ENST00000627685 NIPBLQ6KC79 2804 aaeCLIP6.73□□□□□ -1.33
TCF4-260ENST00000627685 TMED7-TICAM2A0A0A6YYA0 188 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 A0A0G2JPF8 293 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 CFAP73A6NFT4 308 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 LIPT2A6NK58 231 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 ZNF724A8MTY0 619 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 HNRNPCL2B2RXH8 293 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 HNRNPCL3B7ZW38 293 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 ZNF208O43345 1280 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 DNPH1O43598 174 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 HNRNPCL1O60812 293 aaKnown RBP6.73□□□□□ -1.33
TCF4-260ENST00000627685 TMCC2O75069 709 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 CYP7B1O75881 506 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 PRKD3O94806 890 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 NUDT14O95848 222 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 TSPAN15O95858 294 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 PLGP00747 810 aaPredicted RBP6.73□□□□□ -1.33
TCF4-260ENST00000627685 PLAUP00749 431 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 ITGA5P08648 1049 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 HNRNPCL4P0DMR1 293 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 NR2F1P10589 423 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 ETS2P15036 469 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 RYKP34925 604 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 APOBEC1P41238 236 aaKnown RBP6.73□□□□□ -1.33
TCF4-260ENST00000627685 SLC1A3P43003 542 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 CRATP43155 626 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 ANXA11P50995 505 aaKnown RBP6.73□□□□□ -1.33
TCF4-260ENST00000627685 CRISP3P54108 245 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 IRX1P78414 480 aaPredicted RBP6.73□□□□□ -1.33
TCF4-260ENST00000627685 LTBQ06643 244 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 KLF10Q13118 480 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 KEAP1Q14145 624 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 SLC17A1Q14916 467 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 PDK3Q15120 406 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 LIN52Q52LA3 116 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 RABL3Q5HYI8 236 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 DHDDSQ86SQ9 333 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 STK32CQ86UX6 486 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 CCDC103Q8IW40 242 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 ARFGAP2Q8N6H7 521 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 LSMEM1Q8N8F7 131 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 ATP6V1C2Q8NEY4 427 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 TSPEARQ8WU66 669 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 SLC25A43Q8WUT9 341 aaPredicted RBP6.73□□□□□ -1.33
TCF4-260ENST00000627685 TMEM234Q8WY98 164 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 SLC35B4Q969S0 331 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 TAMM41Q96BW9 452 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 REXO5Q96IC2 774 aaKnown RBP6.73□□□□□ -1.33
TCF4-260ENST00000627685 CGREF1Q99674 301 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 MED18Q9BUE0 208 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 HDHD5Q9BXW7 423 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 NELFAQ9H3P2 528 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 RMND5AQ9H871 391 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 BEX4Q9NWD9 120 aaPredicted RBP6.73□□□□□ -1.33
TCF4-260ENST00000627685 ERVK13-1Q9NX77 482 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 MALT1Q9UDY8 824 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 PCDHB10Q9UN67 800 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 TMED7Q9Y3B3 224 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 HDGFL3Q9Y3E1 203 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 FLVCR1Q9Y5Y0 555 aa6.73□□□□□ -1.33
TCF4-260ENST00000627685 A0A0G2JND7 137 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.72□□□□□ -1.33
TCF4-260ENST00000627685 YES1P07947 543 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 CD99P14209 185 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 IGHV1-2P23083 117 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 ADSLP30566 484 aaPredicted RBP6.72□□□□□ -1.33
TCF4-260ENST00000627685 SLC7A1P30825 629 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 HOXC12P31275 282 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 PRKAR1BP31321 381 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 KCNJ5P48544 419 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 CLK1P49759 484 aaKnown RBP6.72□□□□□ -1.33
TCF4-260ENST00000627685 POLR2HP52434 150 aaKnown RBP6.72□□□□□ -1.33
TCF4-260ENST00000627685 MAP2K6P52564 334 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 STX1BP61266 288 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 CDK6Q00534 326 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 LGALS3BPQ08380 585 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 SF3A3Q12874 501 aaKnown RBP eCLIP6.72□□□□□ -1.33
TCF4-260ENST00000627685 BNIP2Q12982 314 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 CAPRIN1Q14444 709 aaKnown RBP6.72□□□□□ -1.33
TCF4-260ENST00000627685 TAB1Q15750 504 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 NRF1Q16656 503 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 DUSP7Q16829 419 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 BEX5Q5H9J7 111 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 GCNT6Q5T4J0 391 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 METTL21CQ5VZV1 264 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 SSX8Q7RTT4 187 aa6.72□□□□□ -1.33
TCF4-260ENST00000627685 TSEN54Q7Z6J9 526 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms