RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 AGBL2Q5U5Z8 902 aa11.86□□□□□ -0.51
SNX1-214ENST00000625244 C16orf87Q6PH81 154 aa11.86□□□□□ -0.51
SNX1-214ENST00000625244 LINGO2Q7L985 606 aa11.86□□□□□ -0.51
SNX1-214ENST00000625244 TMEM45BQ96B21 275 aa11.86□□□□□ -0.51
SNX1-214ENST00000625244 ZNF385AQ96PM9 386 aaKnown RBP11.86□□□□□ -0.51
SNX1-214ENST00000625244 SYT3Q9BQG1 590 aa11.86□□□□□ -0.51
SNX1-214ENST00000625244 CCDC106Q9BWC9 280 aa11.86□□□□□ -0.51
SNX1-214ENST00000625244 NOX3Q9HBY0 568 aa11.86□□□□□ -0.51
SNX1-214ENST00000625244 CTPS2Q9NRF8 586 aa11.86□□□□□ -0.51
SNX1-214ENST00000625244 NKIRAS1Q9NYS0 192 aa11.86□□□□□ -0.51
SNX1-214ENST00000625244 PLEK2Q9NYT0 353 aa11.86□□□□□ -0.51
SNX1-214ENST00000625244 SLC17A7Q9P2U7 560 aa11.86□□□□□ -0.51
SNX1-214ENST00000625244 HDGFL3Q9Y3E1 203 aa11.86□□□□□ -0.51
SNX1-214ENST00000625244 POLR3HQ9Y535 204 aaPredicted RBP11.86□□□□□ -0.51
SNX1-214ENST00000625244 A0A1B0GUS0 222 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 SLC22A31A6NKX4 558 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 PDPK1O15530 556 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 TYROBPO43914 113 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 CDC14BO60729 498 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 TRIM13O60858 407 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 HMOX2P30519 316 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 PKNOX1P55347 436 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 MAGOHP61326 146 aaKnown RBP11.85□□□□□ -0.51
SNX1-214ENST00000625244 LCN2P80188 198 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 LCP2Q13094 533 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 SKP2Q13309 424 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 PCLAFQ15004 111 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 TNFAIP8L3Q5GJ75 292 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 ARMCX4Q5H9R4 360 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 SPDYAQ5MJ70 313 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 OTUD3Q5T2D3 398 aaPredicted RBP11.85□□□□□ -0.51
SNX1-214ENST00000625244 HHATQ5VTY9 493 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 OLFML2AQ68BL7 652 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 REP15Q6BDI9 236 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 ZCCHC12Q6PEW1 402 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 GPRIN3Q6ZVF9 776 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 AAED1Q7RTV5 226 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 LRP11Q86VZ4 500 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 C10orf107Q8IVU9 208 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 HOMEZQ8IX15 550 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 FAM110DQ8TAY7 271 aaPredicted RBP11.85□□□□□ -0.51
SNX1-214ENST00000625244 METTL6Q8TCB7 284 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 MAGEE2Q8TD90 523 aaPredicted RBP11.85□□□□□ -0.51
SNX1-214ENST00000625244 CHMP6Q96FZ7 201 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 EGLN2Q96KS0 407 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 RSPO3Q9BXY4 272 aaPredicted RBP11.85□□□□□ -0.51
SNX1-214ENST00000625244 LAT2Q9GZY6 243 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 BEX1Q9HBH7 125 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 DUSP22Q9NRW4 184 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 MYEF2Q9P2K5 600 aaKnown RBP11.85□□□□□ -0.51
SNX1-214ENST00000625244 TESQ9UGI8 421 aaKnown RBP11.85□□□□□ -0.51
SNX1-214ENST00000625244 CHRNA9Q9UGM1 479 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 SOX21Q9Y651 276 aaPredicted RBP11.85□□□□□ -0.51
SNX1-214ENST00000625244 KCNE3Q9Y6H6 103 aa11.85□□□□□ -0.51
SNX1-214ENST00000625244 ZNF503-AS2A6NEH8 195 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 KRT33AO76009 404 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 NAT2P11245 290 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 CBR1P16152 277 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 NR4A1P22736 598 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 ALDH3A1P30838 453 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 APOBEC1P41238 236 aaKnown RBP11.84□□□□□ -0.51
SNX1-214ENST00000625244 NPRL3Q12980 569 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 UNC50Q53HI1 259 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 ZNF385BQ569K4 471 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 DCST2Q5T1A1 773 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 ABHD12BQ7Z5M8 362 aaPredicted RBP11.84□□□□□ -0.51
SNX1-214ENST00000625244 TREML1Q86YW5 311 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 NUDCD3Q8IVD9 361 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 WDFY1Q8IWB7 410 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 ANKRD42Q8N9B4 389 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 DEFB108BQ8NET1 73 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 TMEM234Q8WY98 164 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 POP5Q969H6 163 aaKnown RBP11.84□□□□□ -0.51
SNX1-214ENST00000625244 ATP6V1G3Q96LB4 118 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 ALKBH3Q96Q83 286 aaPredicted RBP11.84□□□□□ -0.51
SNX1-214ENST00000625244 ZNF382Q96SR6 550 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 STACQ99469 402 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 PAIP2Q9BPZ3 127 aaKnown RBP11.84□□□□□ -0.51
SNX1-214ENST00000625244 PIGUQ9H490 435 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 CRLF2Q9HC73 371 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 TMEM181Q9P2C4 612 aa11.84□□□□□ -0.51
SNX1-214ENST00000625244 SPIN1Q9Y657 262 aaPredicted RBP11.84□□□□□ -0.51
SNX1-214ENST00000625244 TMEM120BA0PK00 339 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 HMGB1P1B2RPK0 211 aaPredicted RBP11.83□□□□□ -0.52
SNX1-214ENST00000625244 ZNF587BE7ETH6 402 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 HMGN2P05204 90 aaKnown RBP11.83□□□□□ -0.52
SNX1-214ENST00000625244 ENO1P06733 434 aaKnown RBP11.83□□□□□ -0.52
SNX1-214ENST00000625244 IMPDH2P12268 514 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 CCNA2P20248 432 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 SERPINB5P36952 375 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 MAGEB1P43366 347 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 RAG2P55895 527 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 RELBQ01201 579 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 LASP1Q14847 261 aaKnown RBP11.83□□□□□ -0.52
SNX1-214ENST00000625244 HSP90B2PQ58FF3 399 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 PDZK1Q5T2W1 519 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 FRMD7Q6ZUT3 714 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 ZNF771Q7L3S4 317 aaPredicted RBP11.83□□□□□ -0.52
SNX1-214ENST00000625244 OR9K2Q8NGE7 335 aa11.83□□□□□ -0.52
SNX1-214ENST00000625244 OR4F5Q8NH21 305 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms