RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 OR2J2O76002 312 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 HIST1H2ABP04908 130 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 GP1BAP07359 652 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 RORCP51449 518 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 HIST3H2AQ7L7L0 130 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 NUP54Q7Z3B4 507 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 MISPQ8IVT2 679 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 ARIH2OSQ8N7S6 290 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 HIST1H2ACQ93077 130 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 C4orf36Q96KX1 117 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 PTDSS2Q9BVG9 487 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 NMNAT2Q9BZQ4 307 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 GALNT8Q9NY28 637 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 MYOTQ9UBF9 498 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 NXT1Q9UKK6 140 aaKnown RBP15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 ZMIZ1Q9ULJ6 1067 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 PEX16Q9Y5Y5 336 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 TRDV1A0A1B0GX56 115 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 SMIM30A4D0T7 59 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 E9PI62 339 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 J3QLW9 94 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 MT-ND5P03915 603 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 UMODP07911 640 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 ZNF883P0CG24 379 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 ZNF19P17023 458 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 SDC2P34741 201 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 OR12D2P58182 307 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 BDH1Q02338 343 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 ATP1A4Q13733 1029 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 PON3Q15166 354 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 CCDC157Q569K6 752 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 LYPD4Q6UWN0 246 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 DBX2Q6ZNG2 339 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 GRINAQ7Z429 371 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 SLC25A36Q96CQ1 311 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 CNN2Q99439 309 aaKnown RBP15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 NPAS1Q99742 590 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 SMURF1Q9HCE7 757 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 SLC6A5Q9Y345 797 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 PTRH2Q9Y3E5 179 aaKnown RBP15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 HRH3Q9Y5N1 445 aa15.73■□□□□ 0.11
PCDHGC3-205ENST00000617641 IL1AP01583 271 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 CYC1P08574 325 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 SDHAP31040 664 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 FGF9P31371 208 aaPredicted RBP15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 DIO1P49895 249 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 LGALS3BPQ08380 585 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 GGTLC2Q14390 218 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 PCOLCEQ15113 449 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 BTBD16Q32M84 506 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 LCN1P1Q5VSP4 162 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 JAZF1Q86VZ6 243 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 GALNT6Q8NCL4 622 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 OR6K6Q8NGW6 343 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 OR11A1Q9GZK7 315 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 SIAEQ9HAT2 523 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 TRIM36Q9NQ86 728 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 RPRD1BQ9NQG5 326 aaKnown RBP15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 MED11Q9P086 117 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 GSTK1Q9Y2Q3 226 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 COL27A1Q8IZC6 1860 aaPredicted RBP15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 A0A075B6Q4 140 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 CD8B2A6NJW9 211 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 FAM171A2A8MVW0 826 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 GABRPO00591 440 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 RNF13O43567 381 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 SULT1C4O75897 302 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 CD8BP10966 210 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 ZNF12P17014 697 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 PPP5CP53041 499 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 ACTC1P68032 377 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 ACTA1P68133 377 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 C17orf67Q0P5P2 114 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 HNRNPA0Q13151 305 aaKnown RBP15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 LYPD8Q6UX82 237 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 Q6ZNX1 250 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 MARCH9Q86YJ5 346 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 SLC25A46Q96AG3 418 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 TSSK2Q96PF2 358 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 TSPAN32Q96QS1 320 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 DEFB126Q9BYW3 111 aa15.72■□□□□ 0.11
PCDHGC3-205ENST00000617641 ANKUB1A6NFN9 424 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 C9J4A7 227 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 H7C1C5 153 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 MAGEB4O15481 346 aaPredicted RBP15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 SELENOFO60613 162 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 NPIPB7O75200 414 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 KLF7O75840 302 aaPredicted RBP15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 HLA-DPB1P04440 258 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 CELA2AP08217 269 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 APEHP13798 732 aaKnown RBP15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 NAGAP17050 411 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 AVPR2P30518 371 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 PYCR1P32322 319 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 LCN6P62502 163 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 RGS21Q2M5E4 152 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 SLC35F2Q8IXU6 374 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 POMGNT2Q8NAT1 580 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 OR10G3Q8NGC4 313 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 KLRF1Q9NZS2 232 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms