RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 SYT7O43581 403 aa12.1□□□□□ -0.47
TCF3-220ENST00000611869 FZD7O75084 574 aa12.1□□□□□ -0.47
TCF3-220ENST00000611869 P04436 131 aa12.1□□□□□ -0.47
TCF3-220ENST00000611869 TFF2Q03403 129 aa12.1□□□□□ -0.47
TCF3-220ENST00000611869 SCRN3Q0VDG4 424 aa12.1□□□□□ -0.47
TCF3-220ENST00000611869 OXA1LQ15070 435 aa12.1□□□□□ -0.47
TCF3-220ENST00000611869 AGAP7PQ5VUJ5 663 aa12.1□□□□□ -0.47
TCF3-220ENST00000611869 SLC16A12Q6ZSM3 486 aa12.1□□□□□ -0.47
TCF3-220ENST00000611869 TPRA1Q86W33 373 aa12.1□□□□□ -0.47
TCF3-220ENST00000611869 FOXRED2Q8IWF2 684 aa12.1□□□□□ -0.47
TCF3-220ENST00000611869 CADM3Q8N126 398 aa12.1□□□□□ -0.47
TCF3-220ENST00000611869 BEST4Q8NFU0 473 aa12.1□□□□□ -0.47
TCF3-220ENST00000611869 APH1BQ8WW43 257 aa12.1□□□□□ -0.47
TCF3-220ENST00000611869 FAM71F1Q96KD3 344 aaPredicted RBP12.1□□□□□ -0.47
TCF3-220ENST00000611869 FCRL1Q96LA6 429 aa12.1□□□□□ -0.47
TCF3-220ENST00000611869 IRF2BPLQ9H1B7 796 aa12.1□□□□□ -0.47
TCF3-220ENST00000611869 TMED7-TICAM2A0A0A6YYA0 188 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 A0A1B0GX78 115 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 NOTOA8MTQ0 251 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 HYAL3O43820 417 aaPredicted RBP12.09□□□□□ -0.47
TCF3-220ENST00000611869 PTH2RP49190 550 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 ZNF84P51523 738 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 SLC22A10Q63ZE4 541 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 NIPAL3Q6P499 406 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 LINC00299Q6ZSB3 139 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 TMEM17Q86X19 198 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 SLC25A46Q96AG3 418 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 POTEKPQ9BYX7 375 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 NXF5Q9H1B4 397 aaKnown RBP12.09□□□□□ -0.47
TCF3-220ENST00000611869 SLC25A19Q9HC21 320 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 B3GAT2Q9NPZ5 323 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 OSGIN1Q9UJX0 560 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 TMED7Q9Y3B3 224 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 CENPBD1B2RD01 187 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 ZNF593O00488 134 aaPredicted RBP12.09□□□□□ -0.47
TCF3-220ENST00000611869 FFAR1O14842 300 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 SURF4O15260 269 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 GPRIN2O60269 458 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 OR7A10O76100 309 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 CLUP10909 449 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 RPS15P62841 145 aaKnown RBP12.09□□□□□ -0.47
TCF3-220ENST00000611869 FZD2Q14332 565 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 ELAVL1Q15717 326 aaKnown RBP12.09□□□□□ -0.47
TCF3-220ENST00000611869 PCGF3Q3KNV8 242 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 CDNFQ49AH0 187 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 OR14L1PQ8NHC6 308 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 NPRL2Q8WTW4 380 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 C11orf54Q9H0W9 315 aaPredicted RBP12.09□□□□□ -0.47
TCF3-220ENST00000611869 POLHQ9Y253 713 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 PCDHGB2Q9Y5G2 931 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 SYPP08247 313 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 POU2F2P09086 479 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 PCMT1P22061 227 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 DAP3P51398 398 aaKnown RBP12.09□□□□□ -0.47
TCF3-220ENST00000611869 FABP5Q01469 135 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 SMAD4Q13485 552 aaKnown RBP12.09□□□□□ -0.47
TCF3-220ENST00000611869 NKAPLQ5M9Q1 402 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 KIRREL2Q6UWL6 708 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 OR2L13Q8N349 312 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 GALNT6Q8NCL4 622 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 OR4D11Q8NGI4 311 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 SLC2A12Q8TD20 617 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 TMEM106AQ96A25 262 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 TSSK2Q96PF2 358 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 ACTR6Q9GZN1 396 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 LDAHQ9H6V9 325 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 FAM60AQ9NP50 221 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 NOX4Q9NPH5 578 aa12.09□□□□□ -0.47
TCF3-220ENST00000611869 EXO1Q9UQ84 846 aaKnown RBP12.09□□□□□ -0.47
TCF3-220ENST00000611869 G3V3Y1 287 aa12.08□□□□□ -0.47
TCF3-220ENST00000611869 IL33O95760 270 aa12.08□□□□□ -0.47
TCF3-220ENST00000611869 MT-ND4P03905 459 aa12.08□□□□□ -0.47
TCF3-220ENST00000611869 RPS27P42677 84 aaKnown RBP12.08□□□□□ -0.47
TCF3-220ENST00000611869 PSPHP78330 225 aa12.08□□□□□ -0.47
TCF3-220ENST00000611869 DCDP81605 110 aaKnown RBP12.08□□□□□ -0.47
TCF3-220ENST00000611869 ZIC1Q15915 447 aa12.08□□□□□ -0.47
TCF3-220ENST00000611869 ZMAT1Q5H9K5 638 aa12.08□□□□□ -0.47
TCF3-220ENST00000611869 SFTPA2Q8IWL1 248 aa12.08□□□□□ -0.47
TCF3-220ENST00000611869 OR7G1Q8NGA0 311 aa12.08□□□□□ -0.47
TCF3-220ENST00000611869 EDAQ92838 391 aa12.08□□□□□ -0.47
TCF3-220ENST00000611869 A6NIZ1 184 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 DISC1C4P0D8 188 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 IFNA7P01567 189 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 PRSS3P35030 304 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 RAP1BP61224 184 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 RAP1AP62834 184 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 LSM11P83369 360 aaKnown RBP eCLIP12.08□□□□□ -0.482e-6■■■□□ 17.6
TCF3-220ENST00000611869 PDSS1Q5T2R2 415 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 C12orf73Q69YU5 71 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 SYT9Q86SS6 491 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 CMIPQ8IY22 773 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 ASB12Q8WXK4 309 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 ZNF486Q96H40 463 aaPredicted RBP12.08□□□□□ -0.48
TCF3-220ENST00000611869 SLC25A44Q96H78 314 aaPredicted RBP12.08□□□□□ -0.48
TCF3-220ENST00000611869 SLC6A7Q99884 636 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 CST11Q9H112 138 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 GAREM1Q9H706 876 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 AKIP1Q9NQ31 210 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 SLC6A14Q9UN76 642 aa12.08□□□□□ -0.48
TCF3-220ENST00000611869 TMEM269A0A1B0GVZ9 245 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms