RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 PROCRQ9UNN8 238 aa12.35□□□□□ -0.43
SHKBP1-218ENST00000598907 PKD1L1Q8TDX9 2849 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 DHRS12A0PJE2 317 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 SLC35F4A4IF30 521 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 B4DXG7 233 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 ZNF264O43296 627 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 OIP5O43482 229 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 HCRTR2O43614 444 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 TCF21O43680 179 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 SCO2O43819 266 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 CSTAP01040 98 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 CRHP06850 196 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 DANCRP0C864 163 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 IGHV4-31P0DP07 118 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 ACAA2P42765 397 aaKnown RBP12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 MAGEA2P43356 314 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 NUDT6P53370 316 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 SKP2Q13309 424 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 IFI44LQ53G44 452 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 ZNF614Q8N883 585 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 LILRB1Q8NHL6 650 aaPredicted RBP12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 PHOSPHO1Q8TCT1 267 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 DUSP19Q8WTR2 217 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 CANT1Q8WVQ1 401 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 PROX1Q92786 737 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 ZMYND19Q96E35 227 aaPredicted RBP12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 HHATLQ9HCP6 504 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 SDHAF3Q9NRP4 125 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 KLRF1Q9NZS2 232 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 PRDM4Q9UKN5 801 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 KCNS2Q9ULS6 477 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 ICAM5Q9UMF0 924 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 SH3GLB1Q9Y371 365 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 RNF115Q9Y4L5 304 aa12.34□□□□□ -0.43
SHKBP1-218ENST00000598907 C17orf51A8MQB3 221 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 TPST2O60704 377 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 ENTPD5O75356 428 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 UBL4AP11441 157 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 HOXB6P17509 224 aaKnown RBP12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 TNFRSF1BP20333 461 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 HNF1AP20823 631 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 PTNP21246 168 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 SLC7A1P30825 629 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 LHX2P50458 406 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 RNF144AP50876 292 aaPredicted RBP12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 CLDN18P56856 261 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 ELF3P78545 371 aaPredicted RBP12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 ZNF117Q03924 483 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 LOXL1Q08397 574 aaPredicted RBP12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 NPTX1Q15818 432 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 NDUFAF6Q330K2 333 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 CLEC2AQ6UVW9 174 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 CBLN3Q6UW01 205 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 CHMP1BQ7LBR1 199 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 PIWIL3Q7Z3Z3 882 aaKnown RBP12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 CARM1Q86X55 608 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 ZNF440Q8IYI8 595 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 FADS6Q8N9I5 356 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 WDSUB1Q8N9V3 476 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 GATSQ8NAP1 163 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 TOR1AIP2Q8NFQ8 470 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 OR6T1Q8NGN1 323 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 SGMS2Q8NHU3 365 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 GEMIN6Q8WXD5 167 aaKnown RBP12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 SLC47A1Q96FL8 570 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 SFXN2Q96NB2 322 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 IL1RAPQ9NPH3 570 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 ARMC1Q9NVT9 282 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 CARD8Q9Y2G2 431 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 FREM1Q5H8C1 2179 aa12.33□□□□□ -0.44
SHKBP1-218ENST00000598907 A0A0G2JK05 382 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 M0R3H8 397 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 GTPBP1O00178 669 aaKnown RBP12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 FAAHO00519 579 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 FMO6PO60774 539 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 CGAP01215 116 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 UBTFL6P0CB48 400 aaPredicted RBP12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 RAP2AP10114 183 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 CD8BP10966 210 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 PRG2P13727 222 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 ZNF708P17019 499 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 PSMA4P25789 261 aaKnown RBP12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 OR1E2P47887 323 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 ERFP50548 548 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 P2RX1P51575 399 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 GFRA1P56159 465 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 DEFA6Q01524 100 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 CHRNB3Q05901 458 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 EPS8Q12929 822 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 FAM98BQ52LJ0 330 aaKnown RBP12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 FKBP9P1Q75LS8 142 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 RBM45Q8IUH3 476 aaKnown RBP12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 C10orf67Q8IYJ2 551 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 B4GALNT2Q8NHY0 566 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 HTRA1Q92743 480 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 SEPHS2Q99611 448 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 KLHDC3Q9BQ90 382 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 OR2B2Q9GZK3 357 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 ACTR6Q9GZN1 396 aa12.32□□□□□ -0.44
SHKBP1-218ENST00000598907 TAS2R10Q9NYW0 307 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms