RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 FAM69AQ5T7M9 428 aa17.23■□□□□ 0.35
PNKP-207ENST00000596014 PAQR6Q6TCH4 344 aa17.23■□□□□ 0.35
PNKP-207ENST00000596014 CYP4Z1Q86W10 505 aa17.23■□□□□ 0.35
PNKP-207ENST00000596014 CCDC103Q8IW40 242 aa17.23■□□□□ 0.35
PNKP-207ENST00000596014 MCEMP1Q8IX19 187 aa17.23■□□□□ 0.35
PNKP-207ENST00000596014 AQP12AQ8IXF9 295 aa17.23■□□□□ 0.35
PNKP-207ENST00000596014 SEPHS2Q99611 448 aa17.23■□□□□ 0.35
PNKP-207ENST00000596014 NAA11Q9BSU3 229 aaPredicted RBP17.23■□□□□ 0.35
PNKP-207ENST00000596014 UCK2Q9BZX2 261 aa17.23■□□□□ 0.35
PNKP-207ENST00000596014 IL1RAPQ9NPH3 570 aa17.23■□□□□ 0.35
PNKP-207ENST00000596014 PTPN13Q12923 2485 aa17.22■□□□□ 0.35
PNKP-207ENST00000596014 ITGA2P17301 1181 aa17.22■□□□□ 0.35
PNKP-207ENST00000596014 KIR2DL2P43627 348 aaPredicted RBP17.22■□□□□ 0.35
PNKP-207ENST00000596014 AQP4P55087 323 aa17.22■□□□□ 0.35
PNKP-207ENST00000596014 RASGEF1BQ0VAM2 473 aa17.22■□□□□ 0.35
PNKP-207ENST00000596014 EEF1A1P5Q5VTE0 462 aa17.22■□□□□ 0.35
PNKP-207ENST00000596014 FAM214BQ7L5A3 538 aa17.22■□□□□ 0.35
PNKP-207ENST00000596014 TMEM99Q8N816 258 aa17.22■□□□□ 0.35
PNKP-207ENST00000596014 CNEP1R1Q8N9A8 125 aa17.22■□□□□ 0.35
PNKP-207ENST00000596014 TMEM255BQ8WV15 326 aa17.22■□□□□ 0.35
PNKP-207ENST00000596014 POP5Q969H6 163 aaKnown RBP17.22■□□□□ 0.35
PNKP-207ENST00000596014 SLCO4A1Q96BD0 722 aa17.22■□□□□ 0.35
PNKP-207ENST00000596014 SLC19A3Q9BZV2 496 aa17.22■□□□□ 0.35
PNKP-207ENST00000596014 NMNAT1Q9HAN9 279 aaPredicted RBP17.22■□□□□ 0.35
PNKP-207ENST00000596014 GP6Q9HCN6 339 aa17.22■□□□□ 0.35
PNKP-207ENST00000596014 MAN2C1Q9NTJ4 1040 aa17.22■□□□□ 0.35
PNKP-207ENST00000596014 KLHL9Q9P2J3 617 aa17.22■□□□□ 0.35
PNKP-207ENST00000596014 ING1Q9UK53 422 aaPredicted RBP17.22■□□□□ 0.35
PNKP-207ENST00000596014 AP4S1Q9Y587 144 aa17.22■□□□□ 0.35
PNKP-207ENST00000596014 RAMP1O60894 148 aa17.21■□□□□ 0.35
PNKP-207ENST00000596014 SS18L1O75177 396 aaPredicted RBP17.21■□□□□ 0.35
PNKP-207ENST00000596014 DIRAS1O95057 198 aa17.21■□□□□ 0.35
PNKP-207ENST00000596014 RBM34P42696 430 aaKnown RBP17.21■□□□□ 0.35
PNKP-207ENST00000596014 LTBQ06643 244 aa17.21■□□□□ 0.35
PNKP-207ENST00000596014 TRAM2Q15035 370 aa17.21■□□□□ 0.35
PNKP-207ENST00000596014 OTUD3Q5T2D3 398 aaPredicted RBP17.21■□□□□ 0.35
PNKP-207ENST00000596014 ABLIM2Q6H8Q1 611 aa17.21■□□□□ 0.35
PNKP-207ENST00000596014 RELL2Q8NC24 303 aaPredicted RBP17.21■□□□□ 0.35
PNKP-207ENST00000596014 PIK3C3Q8NEB9 887 aa17.21■□□□□ 0.35
PNKP-207ENST00000596014 OR6S1Q8NH40 331 aa17.21■□□□□ 0.35
PNKP-207ENST00000596014 TMEM239Q8WW34 195 aa17.21■□□□□ 0.35
PNKP-207ENST00000596014 STARD4Q96DR4 205 aa17.21■□□□□ 0.35
PNKP-207ENST00000596014 HS6ST2Q96MM7 605 aa17.21■□□□□ 0.35
PNKP-207ENST00000596014 PSD2Q9BQI7 771 aa17.21■□□□□ 0.35
PNKP-207ENST00000596014 MEPEQ9NQ76 525 aaPredicted RBP17.21■□□□□ 0.35
PNKP-207ENST00000596014 FREM1Q5H8C1 2179 aa17.21■□□□□ 0.34
PNKP-207ENST00000596014 ADGRG4Q8IZF6 3080 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 FAM90A27PA6NNH2 459 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 KPNA4O00629 521 aaPredicted RBP17.2■□□□□ 0.34
PNKP-207ENST00000596014 FZD7O75084 574 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 FABP3P05413 133 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 UGT2B15P54855 530 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 CTBP2P56545 445 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 SIRPAP78324 504 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 SLC25A35Q3KQZ1 300 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 VWA1Q6PCB0 445 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 PIGXQ8TBF5 258 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 MOGAT1Q96PD6 335 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 MAGIXQ9H6Y5 334 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 BCO1Q9HAY6 547 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 KLHL13Q9P2N7 655 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 AQP7P3A6NL99 342 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 LRRN3E7EW58 273 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 BGLAPP02818 100 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 MT-ND1P03886 318 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 YES1P07947 543 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 CBLP22681 906 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 GTF2E2P29084 291 aaKnown RBP17.2■□□□□ 0.34
PNKP-207ENST00000596014 AGTR1P30556 359 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 MFSD13AQ14CX5 517 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 PDK3Q15120 406 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 PIWIL3Q7Z3Z3 882 aaKnown RBP17.2■□□□□ 0.34
PNKP-207ENST00000596014 BTLAQ7Z6A9 289 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 ZDHHC21Q8IVQ6 265 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 TUSC5Q8IXB3 177 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 C10orf53Q8N6V4 93 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 PIP5K1AQ99755 562 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 KCNJ16Q9NPI9 418 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 EMC9Q9Y3B6 208 aa17.2■□□□□ 0.34
PNKP-207ENST00000596014 HCFC1P51610 2035 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 IGKV3D-15A0A087WSY6 115 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 DHRS12A0PJE2 317 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 NKX2-6A6NCS4 301 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 ZNF716A6NP11 495 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 H1F0P07305 194 aaKnown RBP17.19■□□□□ 0.34
PNKP-207ENST00000596014 GRPRP30550 384 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 P2RY4P51582 365 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 SLC16A1P53985 500 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 CHRNB3Q05901 458 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 ZNF74Q16587 644 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 FAM98BQ52LJ0 330 aaKnown RBP17.19■□□□□ 0.34
PNKP-207ENST00000596014 TMEM201Q5SNT2 666 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 TMEM225Q6GV28 225 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 PFN4Q8NHR9 129 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 ZNF775Q96BV0 537 aaPredicted RBP17.19■□□□□ 0.34
PNKP-207ENST00000596014 PSMG3-AS1Q96PY0 264 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 ANKRD19PQ9H560 264 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 ARMC1Q9NVT9 282 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 SEC14L4Q9UDX3 406 aa17.19■□□□□ 0.34
PNKP-207ENST00000596014 MED31Q9Y3C7 131 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 563.5 ms