RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 MPDZO75970 2070 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 NOTCH2Q04721 2471 aa12.15□□□□□ -0.46
VMP1-217ENST00000593168 TRAV27A0A087WT01 109 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 ZC3H12DA2A288 527 aaKnown RBP12.14□□□□□ -0.47
VMP1-217ENST00000593168 LRRC3CA6NJW4 275 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 LRRN3E7EW58 273 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 EFNA2O43921 213 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 ZIC3O60481 467 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 AGFG2O95081 481 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 NDUFB2O95178 105 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 F10P00742 488 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 PDGFAP04085 211 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 SP1P08047 785 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 TSPAN19P0C672 248 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 RNF224P0DH78 156 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 CD46P15529 392 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 HK1P19367 917 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 CRHBPP24387 322 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 SLC6A6P31641 620 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 GRK5P34947 590 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 RPS5P46782 204 aaKnown RBP12.14□□□□□ -0.47
VMP1-217ENST00000593168 PCYT1AP49585 367 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 PRPS1P60891 318 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 FOXO1Q12778 655 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 MFSD13AQ14CX5 517 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 SNAPC1Q16533 368 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 PGGHGQ32M88 737 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 CLEC12AQ5QGZ9 265 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 SLC25A30Q5SVS4 291 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 FAM69AQ5T7M9 428 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 C1QL3Q5VWW1 255 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 THSD4Q6ZMP0 1018 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 ASB18Q6ZVZ8 466 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 MAMDC2Q7Z304 686 aaPredicted RBP12.14□□□□□ -0.47
VMP1-217ENST00000593168 LNX2Q8N448 690 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 IQCF1Q8N6M8 205 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 C10orf53Q8N6V4 93 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 LRRC17Q8N6Y2 441 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 FDCSPQ8NFU4 85 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 CNIH3Q8TBE1 160 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 SLC25A43Q8WUT9 341 aaPredicted RBP12.14□□□□□ -0.47
VMP1-217ENST00000593168 DDIT4LQ96D03 193 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 Q96MT0 163 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 MOGAT1Q96PD6 335 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 PLCXD1Q9NUJ7 323 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 SCOCQ9UIL1 159 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 DKKL1Q9UK85 242 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 HIF3AQ9Y2N7 669 aa12.14□□□□□ -0.47
VMP1-217ENST00000593168 KLF13Q9Y2Y9 288 aaPredicted RBP12.14□□□□□ -0.47
VMP1-217ENST00000593168 ITPR2Q14571 2701 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 A0A0G2JMM0 328 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 A0A1W2PPB8 328 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 A0A1W2PRS3 328 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 SH3D21A4FU49 640 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 KIR3DP1A8MWS1 328 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 FTCDNL1E5RQL4 147 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 MKRN2OSH3BPM6 223 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 SLC1A7O00341 560 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 BHLHE40O14503 412 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 FZD7O75084 574 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 HIST1H2ABP04908 130 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 ZNF17P17021 662 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 ARG2P78540 354 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 SELENBP1Q13228 472 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 OCLNQ16625 522 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 TMEM201Q5SNT2 666 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 MEDAGQ5VYS4 303 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 C3orf33Q6P1S2 294 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 DPY19L2P2Q6ZN68 376 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 HIST3H2AQ7L7L0 130 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 LSRQ86X29 649 aaPredicted RBP12.13□□□□□ -0.47
VMP1-217ENST00000593168 CCDC103Q8IW40 242 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 SULF2Q8IWU5 870 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 OR2M7Q8NG81 312 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 MFSD8Q8NHS3 518 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 HIST1H2ACQ93077 130 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 SCMH1Q96GD3 660 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 C5orf34Q96MH7 638 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 GPX7Q96SL4 187 aaPredicted RBP12.13□□□□□ -0.47
VMP1-217ENST00000593168 OR11A1Q9GZK7 315 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 NDEL1Q9GZM8 345 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 ENKD1Q9H0I2 346 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 SCN3BQ9NY72 215 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 AASSQ9UDR5 926 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 TPRKBQ9Y3C4 175 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 CORINQ9Y5Q5 1042 aa12.13□□□□□ -0.47
VMP1-217ENST00000593168 SHANK1Q9Y566 2161 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 PINLYPA6NC86 204 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 SHISA8B8ZZ34 492 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 KLRC4-KLRK1H3BQV0 150 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 ARPC3O15145 178 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 SURF4O15260 269 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 TLX2O43763 284 aaPredicted RBP12.12□□□□□ -0.47
VMP1-217ENST00000593168 NME2P1O60361 137 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 PEPDP12955 493 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 APEHP13798 732 aaKnown RBP12.12□□□□□ -0.47
VMP1-217ENST00000593168 NME2P22392 152 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 FMO3P31513 532 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 UQCRC1P31930 480 aa12.12□□□□□ -0.47
VMP1-217ENST00000593168 GABARAPL2P60520 117 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms