RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 CHAF1BQ13112 559 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 LSAMPQ13449 338 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 FHL1Q13642 323 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 ZNF74Q16587 644 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 TIGD6Q17RP2 521 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 TIMM50Q3ZCQ8 353 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 SLC25A53Q5H9E4 307 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 EMC4Q5J8M3 183 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 DESI1Q6ICB0 168 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 MEPCEQ7L2J0 689 aaKnown RBP9.43□□□□□ -0.9
LIG3-203ENST00000585370 MAMDC2Q7Z304 686 aaPredicted RBP9.43□□□□□ -0.9
LIG3-203ENST00000585370 TIPARPQ7Z3E1 657 aaKnown RBP9.43□□□□□ -0.9
LIG3-203ENST00000585370 SLC46A3Q7Z3Q1 461 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 P2RY8Q86VZ1 359 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 RPS19BP1Q86WX3 136 aaKnown RBP9.43□□□□□ -0.9
LIG3-203ENST00000585370 RAB43Q86YS6 212 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 CPOQ8IVL8 374 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 GPALPP1Q8IXQ4 340 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 IL22RA1Q8N6P7 574 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 C10orf53Q8N6V4 93 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 NANOGP1Q8N7R0 232 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 PSD4Q8NDX1 1056 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 NLGN4YQ8NFZ3 816 aaPredicted RBP9.43□□□□□ -0.9
LIG3-203ENST00000585370 OR52I1Q8NGK6 324 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 LGALS12Q96DT0 336 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 RNFT2Q96EX2 444 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 RHNO1Q9BSD3 238 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 RTN4RQ9BZR6 473 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 SLC25A18Q9H1K4 315 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 METTL7AQ9H8H3 244 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 INPP5EQ9NRR6 644 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 HAO2Q9NYQ3 351 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 KLRF1Q9NZS2 232 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 PPP4R1LQ9P1A2 415 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 HIF3AQ9Y2N7 669 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 TMED7Q9Y3B3 224 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 DOPEY2Q9Y3R5 2298 aa9.43□□□□□ -0.9
LIG3-203ENST00000585370 TRAV27A0A087WT01 109 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 A0A087WZY1 265 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 TMEM129A0AVI4 362 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 H3BMQ9 156 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 GNB5O14775 395 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 MYL12BO14950 172 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 NKX2-8O15522 239 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 ZNF208O43345 1280 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 AHCYL1O43865 530 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 ITGA10O75578 1167 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 GABARAPO95166 117 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 LCKP06239 509 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 TSPAN19P0C672 248 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 ASAH2BP0C7U1 165 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 CD36P16671 472 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 MST1P26927 711 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 ATP6V1E1P36543 226 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 RPL4P36578 427 aaKnown RBP9.42□□□□□ -0.9
LIG3-203ENST00000585370 SSR4P51571 173 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 MLF1P58340 268 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 ITGADQ13349 1161 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 DNASE1L3Q13609 305 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 IL10RAQ13651 578 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 SPHARQ15513 63 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 ARMCX4Q5H9R4 360 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 GPR139Q6DWJ6 353 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 H3F3CQ6NXT2 135 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 JMJD6Q6NYC1 403 aaPredicted RBP9.42□□□□□ -0.9
LIG3-203ENST00000585370 THSD4Q6ZMP0 1018 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 GDPGP1Q6ZNW5 385 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 ADGRG3Q86Y34 549 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 OR5M3Q8NGP4 307 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 OR9Q1Q8NGQ5 310 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 ASB15Q8WXK1 588 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 DTNBP1Q96EV8 351 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 MRGPRX4Q96LA9 322 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 SGCZQ96LD1 299 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 FRMD6Q96NE9 622 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 ERMAPQ96PL5 475 aaPredicted RBP9.42□□□□□ -0.9
LIG3-203ENST00000585370 MGLLQ99685 303 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 POTEKPQ9BYX7 375 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 PTGES2Q9H7Z7 377 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 NRIP3Q9NQ35 241 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 HINT3Q9NQE9 182 aaKnown RBP9.42□□□□□ -0.9
LIG3-203ENST00000585370 SERINC1Q9NRX5 453 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 CHRNA9Q9UGM1 479 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 IER3IP1Q9Y5U9 82 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 WIF1Q9Y5W5 379 aa9.42□□□□□ -0.9
LIG3-203ENST00000585370 ANKRD33BA6NCL7 494 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 CCRL2O00421 344 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 ADAM10O14672 748 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 SUSD5O60279 629 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 RAD1O60671 282 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 ZNF354AO60765 605 aaPredicted RBP9.41□□□□□ -0.9
LIG3-203ENST00000585370 NPIPB7O75200 414 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 AHSA1O95433 338 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 PPP1R3DO95685 299 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 TXNDC12O95881 172 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 PTHP01270 115 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 BGLAPP02818 100 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 SERPINA7P05543 415 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 CD14P08571 375 aa9.41□□□□□ -0.9
LIG3-203ENST00000585370 PRKCAP17252 672 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms