RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 E9PI62 339 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 H0YIG0 161 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CLDN5O00501 218 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SYT7O43581 403 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 KDM4BO94953 1096 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SEMA3DO95025 777 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 IL1BP01584 269 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 APOHP02749 345 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 RPSAP08865 295 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 OR4Q2P0C623 313 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 FAM228BP0C875 321 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 NHLRC4P0CG21 123 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 IGHV4-30-4P0DP06 118 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 FGF5P12034 268 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 F3P13726 295 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 PRDX2P32119 198 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CCR2P41597 374 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 PSMD8P48556 350 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 HOXA1P49639 335 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 RAG2P55895 527 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 RPS15AP62244 130 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SNTA1Q13424 505 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SERTAD2Q14140 314 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 MESDQ14696 234 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 EXOC3L2Q2M3D2 409 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CCDC153Q494R4 210 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CEP85LQ5SZL2 805 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 HENMT1Q5T8I9 393 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 NCR3LG1Q68D85 454 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SPOPLQ6IQ16 392 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 Q6ZRG5 221 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 PID1Q7Z2X4 250 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 PAGE2Q7Z2X7 111 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 GLT6D1Q7Z4J2 308 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 TSEN54Q7Z6J9 526 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 AMZ2Q86W34 360 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC43A2Q8N370 569 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SIDT2Q8NBJ9 832 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 OR2L8Q8NGY9 312 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 OR8K3Q8NH51 312 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 PDCD6IPQ8WUM4 868 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC35B4Q969S0 331 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 TCEAL4Q96EI5 215 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SERAC1Q96JX3 654 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 NEDD4LQ96PU5 975 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CYTH2Q99418 400 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CALN1Q9BXU9 219 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 NXF5Q9H1B4 397 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC26A1Q9H2B4 701 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 EML4Q9HC35 981 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 LZTFL1Q9NQ48 299 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 FAM212BQ9NTI7 297 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SEC14L4Q9UDX3 406 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 IL20RAQ9UHF4 553 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CRLS1Q9UJA2 301 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 GRID1Q9ULK0 1009 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 NUP205Q92621 2012 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 COL27A1Q8IZC6 1860 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ANKRD11Q6UB99 2663 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 IGLV5-45A0A087WSX0 123 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 GOLGA6L10A6NI86 522 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 I3L4J1 428 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 WRBO00258 174 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 KPNA3O00505 521 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 RAD51BO15315 384 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 POLR3GO15318 223 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CST8O60676 142 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 DPM1O60762 260 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SERPINA3P01011 423 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 KLK3P07288 261 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CCDC159P0C7I6 412 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 LIPCP11150 499 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ACKR3P25106 362 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 DPP4P27487 766 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ADRA1AP35348 466 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 COILP38432 576 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 DCTP40126 519 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 COMPP49747 757 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SERPINB8P50452 374 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 MNAT1P51948 309 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 PKNOX1P55347 436 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 STXBP1P61764 594 aaKnown RBP1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 HERVK_113P63132 956 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ERVK-8P63133 956 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 CBX1P83916 185 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 GBE1Q04446 702 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 KDSRQ06136 332 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 RBBP4Q09028 425 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 PDK3Q15120 406 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC1A5Q15758 541 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 EFNB3Q15768 340 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 EXT1Q16394 746 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 GTDC1Q4AE62 458 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 GGTA1PQ4G0N0 100 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 LIPKQ5VXJ0 399 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ADAM5Q6NVV9 412 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 FAAP20Q6NZ36 180 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 ZCCHC12Q6PEW1 402 aa1.7□□□□□ -2.14
SMCHD1-211ENST00000584897 SYT10Q6XYQ8 523 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms