RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 CLPTM1LQ96KA5 538 aa13.14□□□□□ -0.31
NPLOC4-207ENST00000572346 MRGPRX4Q96LA9 322 aa13.14□□□□□ -0.31
NPLOC4-207ENST00000572346 KLHL15Q96M94 604 aa13.14□□□□□ -0.31
NPLOC4-207ENST00000572346 MUC13Q9H3R2 512 aa13.14□□□□□ -0.31
NPLOC4-207ENST00000572346 TMEM27Q9HBJ8 222 aa13.14□□□□□ -0.31
NPLOC4-207ENST00000572346 ACER3Q9NUN7 267 aa13.14□□□□□ -0.31
NPLOC4-207ENST00000572346 LAMP3Q9UQV4 416 aa13.14□□□□□ -0.31
NPLOC4-207ENST00000572346 ARPC2O15144 300 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 GSC2O15499 205 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 PRG2P13727 222 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 ADH6P28332 368 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 SHC1P29353 583 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 SFTPDP35247 375 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 ACAA2P42765 397 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 HTR3AP46098 478 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 CARD18P57730 90 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 HOXC5Q00444 222 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 KRTAP1-1Q07627 177 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 TRIM25Q14258 630 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 ZNF239Q16600 458 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 GTF2IRD2BQ6EKJ0 949 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 WBP2NLQ6ICG8 309 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 ALKBH2Q6NS38 261 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 CBLL1Q75N03 491 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 GRINAQ7Z429 371 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 GTF2IRD2Q86UP8 949 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 CARM1Q86X55 608 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 DHFR2Q86XF0 187 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 LILRA2Q8N149 483 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 GABRG1Q8N1C3 465 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 ATP6V1C2Q8NEY4 427 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 STEAP2Q8NFT2 490 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 LILRB1Q8NHL6 650 aaPredicted RBP13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 RNF217Q8TC41 542 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 RNF128Q8TEB7 428 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 ABHD3Q8WU67 409 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 S100PBPQ96BU1 408 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 LRGUKQ96M69 825 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 MCHR1Q99705 422 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 ARHGDIGQ99819 225 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 TRIM2Q9C040 744 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 GORASP2Q9H8Y8 452 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 SERINC1Q9NRX5 453 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 SELENONQ9NZV5 590 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 TESQ9UGI8 421 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 SAMD4AQ9UPU9 718 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 FBN3Q75N90 2809 aa13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 SONP18583 2426 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 CHD3Q12873 2000 aaKnown RBP13.13□□□□□ -0.31
NPLOC4-207ENST00000572346 FAAHO00519 579 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 ADAM11O75078 769 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 NTN1O95631 604 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 CRYBA2P53672 197 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 RPS4XP62701 263 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 TSC22D1Q15714 1073 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 NRF1Q16656 503 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 IFI44LQ53G44 452 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 TMEM201Q5SNT2 666 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 ADAM5Q6NVV9 412 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 TFAP2EQ6VUC0 442 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 CYP2R1Q6VVX0 501 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 COMTD1Q86VU5 262 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 CPNE4Q96A23 557 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 TACO1Q9BSH4 297 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 RSPO3Q9BXY4 272 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 CADM1Q9BY67 442 aaKnown RBP13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 SRXN1Q9BYN0 137 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 ACTR3BQ9P1U1 418 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 PRDM4Q9UKN5 801 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 RNF115Q9Y4L5 304 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 SPIN1Q9Y657 262 aaPredicted RBP13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 V9GYQ6 96 aa13.12□□□□□ -0.31
NPLOC4-207ENST00000572346 COL6A5A8TX70 2615 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 GJE1A6NN92 205 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 OVOL3O00110 214 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 EFNA2O43921 213 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 CRLF1O75462 422 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 CCNA2P20248 432 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 TNFRSF1BP20333 461 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 CXCR1P25024 350 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 ELK4P28324 431 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 TACR3P29371 465 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 IFNA8P32881 189 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 APOBEC1P41238 236 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 SLC1A3P43003 542 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 OR1E2P47887 323 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 POLR2HP52434 150 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 SELENBP1Q13228 472 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 TAB1Q15750 504 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 FXNQ16595 210 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 CLEC12BQ2HXU8 276 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 SLC25A53Q5H9E4 307 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 NCMAPQ5T1S8 102 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 DEF8Q6ZN54 512 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 CXXC5Q7LFL8 322 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 NUFIP2Q7Z417 695 aaKnown RBP13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 VTCN1Q7Z7D3 282 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 TUSC5Q8IXB3 177 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 MAPK1IP1LQ8NDC0 245 aa13.11□□□□□ -0.31
NPLOC4-207ENST00000572346 OR6T1Q8NGN1 323 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms