RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 HIST1H2ABP04908 130 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 CALRP27797 417 aaKnown RBP9.14□□□□□ -0.95
SMG1-208ENST00000563448 SLC6A6P31641 620 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 GRK5P34947 590 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 CHN2P52757 468 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 MLLT10P55197 1068 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 CXADRP78310 365 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 RPL18Q07020 188 aaKnown RBP9.14□□□□□ -0.95
SMG1-208ENST00000563448 ZNF169Q14929 603 aaPredicted RBP9.14□□□□□ -0.95
SMG1-208ENST00000563448 SGCBQ16585 318 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 HIST3H2AQ7L7L0 130 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 SLC43A2Q8N370 569 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 LNX2Q8N448 690 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 TCEANCQ8N8B7 351 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 ZNF417Q8TAU3 575 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 ZCCHC14Q8WYQ9 949 aaKnown RBP9.14□□□□□ -0.95
SMG1-208ENST00000563448 HIST1H2ACQ93077 130 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 ABHD17AQ96GS6 310 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 ZNF587Q96SQ5 575 aaPredicted RBP9.14□□□□□ -0.95
SMG1-208ENST00000563448 ASPNQ9BXN1 380 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 POLDIP3Q9BY77 421 aaKnown RBP9.14□□□□□ -0.95
SMG1-208ENST00000563448 SLC6A15Q9H2J7 730 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 IMPAD1Q9NX62 359 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 QPCTLQ9NXS2 382 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 MRPL39Q9NYK5 338 aaKnown RBP9.14□□□□□ -0.95
SMG1-208ENST00000563448 HDGFL3Q9Y3E1 203 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 PCDHGB7Q9Y5F8 929 aa9.14□□□□□ -0.95
SMG1-208ENST00000563448 CACNA1AO00555 2505 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 A0A0J9YW62 118 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 MS4A18H0YCH9 400 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 PLPP3O14495 311 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 SURF4O15260 269 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 SLC2A10O95528 541 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 FMO3P31513 532 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 PCYT1AP49585 367 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 STARP49675 285 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 FOXK2Q01167 660 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 MFSD13AQ14CX5 517 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 SNAPC1Q16533 368 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 SMN1Q16637 294 aaKnown RBP9.13□□□□□ -0.95
SMG1-208ENST00000563448 MS4A18Q3C1V0 323 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 ALG10Q5BKT4 473 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 C6orf141Q5SZD1 244 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 Q6ZS92 163 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 TMPPEQ6ZT21 453 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 PTCHD4Q6ZW05 846 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 SLC22A16Q86VW1 577 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 ZNF786Q8N393 782 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 FAM109AQ8N4B1 249 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 RBMXL3Q8N7X1 1067 aaKnown RBP9.13□□□□□ -0.95
SMG1-208ENST00000563448 FAM98AQ8NCA5 519 aaKnown RBP9.13□□□□□ -0.95
SMG1-208ENST00000563448 SMPDL3BQ92485 455 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 IL4I1Q96RQ9 567 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 GPX7Q96SL4 187 aaPredicted RBP9.13□□□□□ -0.95
SMG1-208ENST00000563448 TAPBPLQ9BX59 468 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 NRIP3Q9NQ35 241 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 ALKBH4Q9NXW9 302 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 LIPGQ9Y5X9 500 aa9.13□□□□□ -0.95
SMG1-208ENST00000563448 C11orf98E9PRG8 122 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 H0YC42 278 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 ACOT7O00154 380 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 SULT2B1O00204 365 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 AKR7A3O95154 331 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 PMS2P2O95744 297 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 ITGB2P05107 769 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 F13BP05160 661 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 LYNP07948 512 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 ADORA3P0DMS8 318 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 RPL4P36578 427 aaKnown RBP9.12□□□□□ -0.95
SMG1-208ENST00000563448 DIO1P49895 249 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 SUCLG1P53597 346 aaKnown RBP9.12□□□□□ -0.95
SMG1-208ENST00000563448 CLDN20P56880 219 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 OR2B6P58173 313 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 CTXN1P60606 82 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 SNRPGP62308 76 aaKnown RBP9.12□□□□□ -0.95
SMG1-208ENST00000563448 GTF3C1Q12789 2109 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 PMS2P3Q13401 168 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 SLC10A1Q14973 349 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 ZNF362Q5T0B9 420 aaPredicted RBP9.12□□□□□ -0.95
SMG1-208ENST00000563448 SLC35F1Q5T1Q4 408 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 DPY19L2P2Q6ZN68 376 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 TRILQ7L0X0 811 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 GGNQ86UU5 652 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 SCAIQ8N9R8 606 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 OR8J1Q8NGP2 316 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 TRUB1Q8WWH5 349 aaKnown RBP9.12□□□□□ -0.95
SMG1-208ENST00000563448 HDAC2Q92769 488 aaKnown RBP9.12□□□□□ -0.95
SMG1-208ENST00000563448 MIB2Q96AX9 1013 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 KLHL15Q96M94 604 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 ERMAPQ96PL5 475 aaPredicted RBP9.12□□□□□ -0.95
SMG1-208ENST00000563448 DEFB127Q9H1M4 99 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 ACKR4Q9NPB9 350 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 CHST11Q9NPF2 352 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 BAIAP2Q9UQB8 552 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 TRAPPC4Q9Y296 219 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 TP53TG5Q9Y2B4 290 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 ADAM18Q9Y3Q7 739 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 CORINQ9Y5Q5 1042 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 IER3IP1Q9Y5U9 82 aa9.12□□□□□ -0.95
SMG1-208ENST00000563448 ALPK2Q86TB3 2170 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms