RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 BBIP1A8MTZ0 92 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 ATP8B1O43520 1251 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 LYPD3O95274 346 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 THY1P04216 161 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 CBLP22681 906 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 SEC24CP53992 1094 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 NR1H2P55055 460 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 CDH12P55289 794 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 NCALDP61601 193 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 ADAM8P78325 824 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 LTBQ06643 244 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 BSPH1Q075Z2 132 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 PPA1Q15181 289 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 NRF1Q16656 503 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 COQ5Q5HYK3 327 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 NCMAPQ5T1S8 102 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 ULK3Q6PHR2 472 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 CREB3L2Q70SY1 520 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 AAED1Q7RTV5 226 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 PATL1Q86TB9 770 aaKnown RBP10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 KRTAP1-3Q8IUG1 177 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 OR8J3Q8NGG0 315 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 OR52N5Q8NH56 324 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 VANGL1Q8TAA9 524 aaPredicted RBP10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 DNAJA4Q8WW22 397 aaPredicted RBP10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 TMEM45BQ96B21 275 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 RCN3Q96D15 328 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 SLC47A1Q96FL8 570 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 ZNF583Q96ND8 569 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 MCHR1Q99705 422 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 SF3B5Q9BWJ5 86 aaKnown RBP10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 C12orf10Q9HB07 376 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 TMEM27Q9HBJ8 222 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 PARPBPQ9NWS1 579 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 B3GAT1Q9P2W7 334 aa10.25□□□□□ -0.77
RABGGTA-216ENST00000560243 ZANQ9Y493 2812 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 TRAV36DV7A0A075B6V5 113 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 A0A087WUJ7 227 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 CIB4A0PJX0 185 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 CPSF4LA6NMK7 179 aaKnown RBP10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 LRRN3E7EW58 273 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 M0R082 166 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 CLOCKO15516 846 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 FZD7O75084 574 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 TNFRSF1BP20333 461 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 GRPRP30550 384 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 SELENOPP49908 381 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 GYS2P54840 703 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 SLC25A3Q00325 362 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 FOXD4Q12950 439 aaPredicted RBP10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 MAPRE2Q15555 327 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 GABRA6Q16445 453 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 TIMM23BQ5SRD1 257 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 FAM91A1Q658Y4 838 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 WDR88Q6ZMY6 472 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 CCDC80Q76M96 950 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 LINGO2Q7L985 606 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 RANBP3LQ86VV4 465 aaPredicted RBP10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 TREML1Q86YW5 311 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 TGIF2LYQ8IUE0 185 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 SLC30A8Q8IWU4 369 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 WFDC11Q8NEX6 87 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 BHLHE22Q8NFJ8 381 aaPredicted RBP10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 ZNF417Q8TAU3 575 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 IGFBPL1Q8WX77 278 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 AKAP1Q92667 903 aaKnown RBP eCLIP10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 MUS81Q96NY9 551 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 MOGAT1Q96PD6 335 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 ZNF587Q96SQ5 575 aaPredicted RBP10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 CCL19Q99731 98 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 ELAC2Q9BQ52 826 aaKnown RBP10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 USB1Q9BQ65 265 aaKnown RBP10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 ECSITQ9BQ95 431 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 TMUB1Q9BVT8 246 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 C1QTNF6Q9BXI9 259 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 SLCO5A1Q9H2Y9 848 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 MRGBPQ9NV56 204 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 BEX4Q9NWD9 120 aaPredicted RBP10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 TAS2R16Q9NYV7 291 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 UPB1Q9UBR1 384 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 RASD1Q9Y272 281 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 RNF115Q9Y4L5 304 aa10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 HEATR1Q9H583 2144 aaKnown RBP10.24□□□□□ -0.77
RABGGTA-216ENST00000560243 C2CD3Q4AC94 2353 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 NIPBLQ6KC79 2804 aaeCLIP10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 HS3ST1O14792 307 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 SHOX2O60902 331 aaPredicted RBP10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 VAMP5O95183 116 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 HPRP00739 348 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 NPPAP01160 153 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 BGLAPP02818 100 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 C8BP07358 591 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 CD3EP07766 207 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 COX4I1P13073 169 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 CDH2P19022 906 aaPredicted RBP10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 HOXC12P31275 282 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 ZNF83P51522 516 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 CLDN17P56750 224 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 ENTPD8Q5MY95 495 aa10.23□□□□□ -0.77
RABGGTA-216ENST00000560243 FAM69AQ5T7M9 428 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms