RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 SEMA4CQ9C0C4 833 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 GSTK1Q9Y2Q3 226 aa16.18■□□□□ 0.18
SNX1-208ENST00000559844 IGF2RP11717 2491 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 DAPL1A0PJW8 107 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 CDC14CA4D256 554 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 C1QTNF9BB2RNN3 333 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 ARPC3O15145 178 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 KLK10O43240 276 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 IL1AP01583 271 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 C1QTNF9P0C862 333 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 CAPZA2P47755 286 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 SLC16A1P53985 500 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 RPS25P62851 125 aaKnown RBP16.17■□□□□ 0.18
SNX1-208ENST00000559844 ACTC1P68032 377 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 ACTA1P68133 377 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 ZNF45Q02386 682 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 ZNF117Q03924 483 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 ZNF791Q3KP31 576 aaPredicted RBP16.17■□□□□ 0.18
SNX1-208ENST00000559844 FCRLBQ6BAA4 426 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 FAM98AQ8NCA5 519 aaKnown RBP16.17■□□□□ 0.18
SNX1-208ENST00000559844 KCTD7Q96MP8 289 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 GPX7Q96SL4 187 aaPredicted RBP16.17■□□□□ 0.18
SNX1-208ENST00000559844 MESP1Q9BRJ9 268 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 NDEL1Q9GZM8 345 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 IER3IP1Q9Y5U9 82 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 URB1O60287 2271 aaKnown RBP16.17■□□□□ 0.18
SNX1-208ENST00000559844 MCIDASD6RGH6 385 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 HCRTR2O43614 444 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 SULT1C4O75897 302 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 CYC1P08574 325 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 PGCP20142 388 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 RPS19P39019 145 aaKnown RBP16.17■□□□□ 0.18
SNX1-208ENST00000559844 CD79BP40259 229 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 RNF4P78317 190 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 GPR50Q13585 617 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 IL10RAQ13651 578 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 GALEQ14376 348 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 ZNF74Q16587 644 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 LCN1P1Q5VSP4 162 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 CD200R1LQ6Q8B3 271 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 LSRQ86X29 649 aaPredicted RBP16.17■□□□□ 0.18
SNX1-208ENST00000559844 LRRC17Q8N6Y2 441 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 OR52E2Q8NGJ4 325 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 CHPT1Q8WUD6 406 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 TRMT61AQ96FX7 289 aaKnown RBP16.17■□□□□ 0.18
SNX1-208ENST00000559844 MED18Q9BUE0 208 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 ALG8Q9BVK2 526 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 ADAM19Q9H013 955 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 SLC6A5Q9Y345 797 aa16.17■□□□□ 0.18
SNX1-208ENST00000559844 PNMA8CA0A1B0GUJ8 204 aa16.16■□□□□ 0.18
SNX1-208ENST00000559844 TRDV1A0A1B0GX56 115 aa16.16■□□□□ 0.18
SNX1-208ENST00000559844 ZC3H12DA2A288 527 aaKnown RBP16.16■□□□□ 0.18
SNX1-208ENST00000559844 OR6C70A6NIJ9 312 aa16.16■□□□□ 0.18
SNX1-208ENST00000559844 SBK2P0C263 348 aa16.16■□□□□ 0.18
SNX1-208ENST00000559844 FGF9P31371 208 aaPredicted RBP16.16■□□□□ 0.18
SNX1-208ENST00000559844 OTX2P32243 289 aa16.16■□□□□ 0.18
SNX1-208ENST00000559844 RUNX1T1Q06455 604 aa16.16■□□□□ 0.18
SNX1-208ENST00000559844 LGALS3BPQ08380 585 aa16.16■□□□□ 0.18
SNX1-208ENST00000559844 EFR3AQ14156 821 aa16.16■□□□□ 0.18
SNX1-208ENST00000559844 C11orf91Q3C1V1 193 aa16.16■□□□□ 0.18
SNX1-208ENST00000559844 CRTC2Q53ET0 693 aaPredicted RBP16.16■□□□□ 0.18
SNX1-208ENST00000559844 BTLAQ7Z6A9 289 aa16.16■□□□□ 0.18
SNX1-208ENST00000559844 MARCH3Q86UD3 253 aa16.16■□□□□ 0.18
SNX1-208ENST00000559844 C10orf53Q8N6V4 93 aa16.16■□□□□ 0.18
SNX1-208ENST00000559844 TMEM203Q969S6 136 aa16.16■□□□□ 0.18
SNX1-208ENST00000559844 NRIP3Q9NQ35 241 aa16.16■□□□□ 0.18
SNX1-208ENST00000559844 ASB6Q9NWX5 421 aa16.16■□□□□ 0.18
SNX1-208ENST00000559844 PPIEQ9UNP9 301 aaKnown RBP16.16■□□□□ 0.18
SNX1-208ENST00000559844 CDC40O60508 579 aaKnown RBP eCLIP16.15■□□□□ 0.182e-6■■■■■ 31.7
SNX1-208ENST00000559844 HLA-DPB1P04440 258 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 HIST1H1CP16403 213 aaKnown RBP16.15■□□□□ 0.18
SNX1-208ENST00000559844 TACR3P29371 465 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 SSPNQ14714 243 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 UNQ6494/PRO21346Q6UXR6 183 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 MISPQ8IVT2 679 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 TMEM99Q8N816 258 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 CYB561A3Q8NBI2 242 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 NFAM1Q8NET5 270 aaPredicted RBP16.15■□□□□ 0.18
SNX1-208ENST00000559844 ATP6V1C2Q8NEY4 427 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 OR10H4Q8NGA5 316 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 OR5W2Q8NH69 310 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 NUBPLQ8TB37 319 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 C8orf44Q96CB5 159 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 COX4I2Q96KJ9 171 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 ADGRL4Q9HBW9 690 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 NANSQ9NR45 359 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 TBCCD1Q9NVR7 557 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 BABAM2Q9NXR7 383 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 HIF3AQ9Y2N7 669 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 HS3ST3B1Q9Y662 390 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 CHD8Q9HCK8 2581 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 LRRN3E7EW58 273 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 LALBAP00709 142 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 IGHEP01854 428 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 GAAP10253 952 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 APEHP13798 732 aaKnown RBP16.15■□□□□ 0.18
SNX1-208ENST00000559844 GALP22466 123 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 ITPKBP27987 946 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 ETV6P41212 452 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 CBFBQ13951 182 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms