RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 FGF20Q9NP95 211 aaPredicted RBP6.68□□□□□ -1.34
SPG11-204ENST00000557866 MED17Q9NVC6 651 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 PTTG2Q9NZH5 202 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 MED11Q9P086 117 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 NCDNQ9UBB6 729 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 CHRNA9Q9UGM1 479 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 ENPP5Q9UJA9 477 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 LSM2Q9Y333 95 aaKnown RBP6.68□□□□□ -1.34
SPG11-204ENST00000557866 OTOGLQ3ZCN5 2332 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 TMED7-TICAM2A0A0A6YYA0 188 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 NSG1A0A0A6YYJ2 146 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 SPAARA0A1B0GVQ0 90 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 A0A1W2PPW3 197 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 ANKUB1A6NFN9 424 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 MCIDASD6RGH6 385 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 J3QRE1 110 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 IMPA2O14732 288 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 SUSD5O60279 629 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 ITGA10O75578 1167 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 TRMUO75648 421 aaKnown RBP6.67□□□□□ -1.34
SPG11-204ENST00000557866 GABARAPO95166 117 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 NDUFB2O95178 105 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 IGHEP01854 428 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 BGLAPP02818 100 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 TSPAN19P0C672 248 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 ASAH2BP0C7U1 165 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 GP1BBP13224 206 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 BMP7P18075 431 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 PGCP20142 388 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 NR4A1P22736 598 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 HTR1FP30939 366 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 SLC6A6P31641 620 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 OTX2P32243 289 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 AQP2P41181 271 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 SLC9A3P48764 834 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 POLR2HP52434 150 aaKnown RBP6.67□□□□□ -1.34
SPG11-204ENST00000557866 TMBIM6P55061 237 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 CDH11P55287 796 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 MLF1P58340 268 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 C17orf67Q0P5P2 114 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 EIF3IQ13347 325 aaKnown RBP6.67□□□□□ -1.34
SPG11-204ENST00000557866 DNASE1L3Q13609 305 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 SSPNQ14714 243 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 CTF1Q16619 201 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 TIGD6Q17RP2 521 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 LCE1DQ5T752 114 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 RNLSQ5VYX0 342 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 RPL13AP3Q6NVV1 102 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 NIPAL3Q6P499 406 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 PLBD1Q6P4A8 553 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 ARSKQ6UWY0 536 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 B3GLCTQ6Y288 498 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 FAM214BQ7L5A3 538 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 CXXC5Q7LFL8 322 aaKnown RBP6.67□□□□□ -1.34
SPG11-204ENST00000557866 SHFQ7M4L6 423 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 ZNF367Q7RTV3 350 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 CYP4Z2PQ8N1L4 340 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 SLC43A2Q8N370 569 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 SLC15A4Q8N697 577 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 OR4F15Q8NGB8 312 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 C9orf43Q8TAL5 461 aaPredicted RBP6.67□□□□□ -1.34
SPG11-204ENST00000557866 SLC22A8Q8TCC7 542 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 FCGR1BQ92637 280 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 KISS1RQ969F8 398 aaPredicted RBP6.67□□□□□ -1.34
SPG11-204ENST00000557866 CRELD1Q96HD1 420 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 GPX7Q96SL4 187 aaPredicted RBP6.67□□□□□ -1.34
SPG11-204ENST00000557866 TSC22D3Q99576 134 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 ZNF649Q9BS31 505 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 LRFN3Q9BTN0 628 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 PRRG3Q9BZD7 231 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 FN3KQ9H479 309 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 CDCP1Q9H5V8 836 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 PROK2Q9HC23 129 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 SH2D2AQ9NP31 389 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 CMC2Q9NRP2 79 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 TAS2R10Q9NYW0 307 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 WARS2Q9UGM6 360 aaKnown RBP6.67□□□□□ -1.34
SPG11-204ENST00000557866 FBXL4Q9UKA2 621 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.67□□□□□ -1.34
SPG11-204ENST00000557866 DIMT1Q9UNQ2 313 aaKnown RBP6.67□□□□□ -1.34
SPG11-204ENST00000557866 BAIAP2Q9UQB8 552 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 EXOGQ9Y2C4 368 aaKnown RBP6.67□□□□□ -1.34
SPG11-204ENST00000557866 TMED7Q9Y3B3 224 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 ZNF337Q9Y3M9 751 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 IER3IP1Q9Y5U9 82 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 MRPS18BQ9Y676 258 aaKnown RBP6.67□□□□□ -1.34
SPG11-204ENST00000557866 CHCHD2Q9Y6H1 151 aaPredicted RBP6.67□□□□□ -1.34
SPG11-204ENST00000557866 KIF26BQ2KJY2 2108 aa6.67□□□□□ -1.34
SPG11-204ENST00000557866 TRAV36DV7A0A075B6V5 113 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 LOC101059948A0A1B0GTJ6 334 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 HTR3EA5X5Y0 456 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 ETV2O00321 342 aaPredicted RBP6.66□□□□□ -1.34
SPG11-204ENST00000557866 EFNA2O43921 213 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 RAD1O60671 282 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 TNFSF15O95150 251 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 NUDT14O95848 222 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 CD63P08962 238 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 CLUP10909 449 aa6.66□□□□□ -1.34
SPG11-204ENST00000557866 PEPDP12955 493 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms