RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 PTAFRP25105 342 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 THBS2P35442 1172 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 APOBEC1P41238 236 aaKnown RBP8.77□□□□□ -1.01
SCFD1-220ENST00000556486 CLDN8P56748 225 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 DSCR9P59020 149 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 H3F3AP84243 136 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 EMX2Q04743 252 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 MAD2L1Q13257 205 aaPredicted RBP8.77□□□□□ -1.01
SCFD1-220ENST00000556486 CR1LQ2VPA4 569 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 SPDYE7PQ495Y7 208 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 NKAPLQ5M9Q1 402 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 PDZK1Q5T2W1 519 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 FBXW9Q5XUX1 488 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 C11orf71Q6IPW1 123 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 B3GLCTQ6Y288 498 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 EIF3MQ7L2H7 374 aaKnown RBP8.77□□□□□ -1.01
SCFD1-220ENST00000556486 KRTCAP2Q8N6L1 136 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 FNDC5Q8NAU1 212 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 HIPK4Q8NE63 616 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 OR5D16Q8NGK9 328 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 UBLCP1Q8WVY7 318 aaPredicted RBP8.77□□□□□ -1.01
SCFD1-220ENST00000556486 LRTOMTQ8WZ04 291 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 CHMP6Q96FZ7 201 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 OR5B2Q96R09 309 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 ZNF300Q96RE9 604 aaPredicted RBP8.77□□□□□ -1.01
SCFD1-220ENST00000556486 DUSP26Q9BV47 211 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 CCDC106Q9BWC9 280 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 EXOSC3Q9NQT5 275 aaKnown RBP8.77□□□□□ -1.01
SCFD1-220ENST00000556486 SERINC1Q9NRX5 453 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 GIMAP2Q9UG22 337 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 PRSS50Q9UI38 385 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 MGAT4BQ9UQ53 548 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 SLC35A3Q9Y2D2 325 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 MGAM2Q2M2H8 2515 aa8.77□□□□□ -1.01
SCFD1-220ENST00000556486 IGHV3-15A0A0B4J1V0 119 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 IGHV4-61A0A0C4DH41 118 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 CENPVL1A0A0U1RR11 272 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 SMIM23A6NLE4 172 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 PDLIM1O00151 329 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 SULT2B1O00204 365 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 GPR171O14626 319 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 ANKRD28O15084 1053 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 SCN2BO60939 215 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 SLU7O95391 586 aaKnown RBP8.76□□□□□ -1.01
SCFD1-220ENST00000556486 PMS2P2O95744 297 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 CSTAP01040 98 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 G6PDP11413 515 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 APEHP13798 732 aaKnown RBP8.76□□□□□ -1.01
SCFD1-220ENST00000556486 MATN1P21941 496 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 TTKP33981 857 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 PGM1P36871 562 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 ETV4P43268 484 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 GZMKP49863 264 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 FABP6P51161 128 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 ZNF83P51522 516 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 MAP2K6P52564 334 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 MVKQ03426 396 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 SQLEQ14534 574 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 SLC22A25Q6T423 547 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 TMEM108Q6UXF1 575 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 C6orf120Q7Z4R8 191 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 LRRC34Q8IZ02 419 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 MUC15Q8N387 334 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 TMCO5AQ8N6Q1 288 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 NRG4Q8WWG1 115 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 BOD1Q96IK1 185 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 MUS81Q96NY9 551 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 C1orf50Q9BV19 199 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 THUMPD3Q9BV44 507 aaKnown RBP8.76□□□□□ -1.01
SCFD1-220ENST00000556486 MECRQ9BV79 373 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 C1QTNF6Q9BXI9 259 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 CBLN4Q9NTU7 201 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 EXD2Q9NVH0 621 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 TAS2R16Q9NYV7 291 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 SLC17A7Q9P2U7 560 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 CHRNA9Q9UGM1 479 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 ZDHHC2Q9UIJ5 367 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 PRDM4Q9UKN5 801 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 HDGFL3Q9Y3E1 203 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 SLC25A15Q9Y619 301 aa8.76□□□□□ -1.01
SCFD1-220ENST00000556486 SPIN1Q9Y657 262 aaPredicted RBP8.76□□□□□ -1.01
SCFD1-220ENST00000556486 RNF103-CHMP3A0A140T963 221 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 H7C417 338 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 BPGMP07738 259 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 DHRS4L1P0CG22 281 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 SRP14P37108 136 aaKnown RBP8.75□□□□□ -1.01
SCFD1-220ENST00000556486 CCR4P51679 360 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 ACTG1P63261 375 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 CHRNEQ04844 493 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 MERTKQ12866 999 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 GPR68Q15743 365 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 MAPK14Q16539 360 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 C3orf36Q3SXR2 165 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 OR7E24Q6IFN5 339 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 TYW3Q6IPR3 259 aaKnown RBP8.75□□□□□ -1.01
SCFD1-220ENST00000556486 ZNF544Q6NX49 715 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 ZCCHC23Q6ZST2 131 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 GRINAQ7Z429 371 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 ZNF100Q8IYN0 542 aa8.75□□□□□ -1.01
SCFD1-220ENST00000556486 FBXL14Q8N1E6 418 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms