RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 C10orf53Q8N6V4 93 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 ZNF433Q8N7K0 673 aaPredicted RBP6.41□□□□□ -1.38
TDP1-213ENST00000555880 ELOA3Q8NG57 546 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 ANGPTL6Q8NI99 470 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 HAVCR2Q8TDQ0 301 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 GPBAR1Q8TDU6 330 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 C15orf40Q8WUR7 153 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 GIMAP1Q8WWP7 306 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 PATE1Q8WXA2 126 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 TTC9Q92623 222 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 MRGPRX1Q96LB2 322 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 VSTM2LQ96N03 204 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 ZNF578Q96N58 590 aaPredicted RBP6.41□□□□□ -1.38
TDP1-213ENST00000555880 DGAT2Q96PD7 388 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 NMNAT3Q96T66 252 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 RPP25Q9BUL9 199 aaKnown RBP6.41□□□□□ -1.38
TDP1-213ENST00000555880 RBCK1Q9BYM8 510 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 SLC19A3Q9BZV2 496 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 SEMA6CQ9H3T2 930 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 ZCCHC4Q9H5U6 513 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 RXFP3Q9NSD7 469 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 B3GNT2Q9NY97 397 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 ICAM5Q9UMF0 924 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 ZNF281Q9Y2X9 895 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 ADAM18Q9Y3Q7 739 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 A0A0B4J203 849 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 A0A1B0GTQ1 180 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 OR5K3A6NET4 321 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 NAP1L6A6NFF2 107 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 SERINC4A6NH21 518 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 CCDC85CA6NKD9 419 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 AIPO00170 330 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 MAGEB4O15481 346 aaPredicted RBP6.41□□□□□ -1.38
TDP1-213ENST00000555880 ZNF749O43361 778 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 SELENOFO60613 162 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 PRAF2O60831 178 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 CTNSO60931 367 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 PEX14O75381 377 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 SERPINI2O75830 405 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 OR7A10O76100 309 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 IGKV1D-16P01601 117 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 PNMTP11086 282 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 CTSEP14091 401 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 HPGDP15428 266 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 S1PR1P21453 382 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 GDNFP39905 211 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 PSMB10P40306 273 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 OR3A3P47888 321 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 CCR6P51684 374 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 PER3P56645 1201 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 ERVK-25P63136 954 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 MRPS10P82664 201 aaKnown RBP6.41□□□□□ -1.38
TDP1-213ENST00000555880 RPL6Q02878 288 aaKnown RBP6.41□□□□□ -1.38
TDP1-213ENST00000555880 RIPPLY1Q0D2K3 151 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 KLF9Q13886 244 aaPredicted RBP6.41□□□□□ -1.38
TDP1-213ENST00000555880 GSG1Q2KHT4 349 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 COL28A1Q2UY09 1125 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 CEP78Q5JTW2 689 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 ZBTB37Q5TC79 503 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 DGAT2L6Q6ZPD8 337 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 KCTD20Q7Z5Y7 419 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 SYT9Q86SS6 491 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 TIGD4Q8IY51 512 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 ZNF527Q8NB42 609 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 ZSCAN1Q8NBB4 408 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 RCBTB1Q8NDN9 531 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 OR11H7Q8NGC8 314 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 OR4N2Q8NGD1 307 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 OR4D9Q8NGE8 314 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 SLC37A2Q8TED4 501 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 FCAMRQ8WWV6 532 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 HSD17B8Q92506 261 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 S100A16Q96FQ6 103 aaKnown RBP6.41□□□□□ -1.38
TDP1-213ENST00000555880 GPR137Q96N19 417 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 CCNL2Q96S94 520 aaPredicted RBP6.41□□□□□ -1.38
TDP1-213ENST00000555880 PDCD1LG2Q9BQ51 273 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 C20orf85Q9H1P6 137 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 CLEC4MQ9H2X3 399 aaPredicted RBP6.41□□□□□ -1.38
TDP1-213ENST00000555880 NOX4Q9NPH5 578 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 HCN3Q9P1Z3 774 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 KLHL9Q9P2J3 617 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 SLC23A1Q9UHI7 598 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 HS3ST3A1Q9Y663 406 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 RNF215Q9Y6U7 377 aa6.41□□□□□ -1.38
TDP1-213ENST00000555880 MYO9BQ13459 2157 aa6.4□□□□□ -1.38
TDP1-213ENST00000555880 MEIKINA0A087WXM9 373 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 A0A0A6YYC8 382 aaPredicted RBP6.4□□□□□ -1.39
TDP1-213ENST00000555880 A0A1B0GVT2 93 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 A0A1W2PQ72 361 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 TCRBV21S2A2A0A5A6 115 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 IFITM5A6NNB3 132 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 NPIPB9F8W1W9 429 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 PRAMEF26H0Y7S4 382 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 GABARAPH6UMI1 98 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 I3L1I5 382 aaPredicted RBP6.4□□□□□ -1.39
TDP1-213ENST00000555880 SULT1B1O43704 296 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 ADAM11O75078 769 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 KHDRBS3O75525 346 aaKnown RBP6.4□□□□□ -1.39
TDP1-213ENST00000555880 KRT33AO76009 404 aa6.4□□□□□ -1.39
TDP1-213ENST00000555880 GLCEO94923 617 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms