RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 NPHS1O60500 1241 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 FGF4P08620 206 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 IFI6P09912 130 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 OR4A8P0C604 315 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 APEHP13798 732 aaKnown RBP5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 ITGA2P17301 1181 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 PGCP20142 388 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 PTAFRP25105 342 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 LCN1P31025 176 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 CHI3L1P36222 383 aaPredicted RBP5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 NR4A2P43354 598 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 AQP5P55064 265 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 CLDN8P56748 225 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 UFM1P61960 85 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 CSNK2A1P68400 391 aaPredicted RBP5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 KCNJ10P78508 379 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 HGFACQ04756 655 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 SLC17A1Q14916 467 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 MAPK11Q15759 364 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 ADIPOQQ15848 244 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 NRF1Q16656 503 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 ALKBH6Q3KRA9 238 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 LSM12Q3MHD2 195 aaKnown RBP5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 OTUD3Q5T2D3 398 aaPredicted RBP5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 ATG16L1Q676U5 607 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 KLHL17Q6TDP4 642 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 RINLQ6ZS11 566 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 AAED1Q7RTV5 226 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 CDK20Q8IZL9 346 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 CLIP4Q8N3C7 705 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 CADM2Q8N3J6 435 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 ARFGAP2Q8N6H7 521 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 OR9K2Q8NGE7 335 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 KIF18AQ8NI77 898 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 ST8SIA1Q92185 356 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 TAF15Q92804 592 aaKnown RBP eCLIP5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 SLC25A36Q96CQ1 311 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 MTERF3Q96E29 417 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 ZNF764Q96H86 408 aaPredicted RBP5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 SLC35A5Q9BS91 424 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 TRMOQ9BU70 441 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 NMUR2Q9GZQ4 415 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 SLC38A1Q9H2H9 487 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 SERINC1Q9NRX5 453 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 TAS2R16Q9NYV7 291 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 EMC3Q9P0I2 261 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 MARCOQ9UEW3 520 aaPredicted RBP5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 TMED5Q9Y3A6 229 aa5.94□□□□□ -1.46
PRPF40B-214ENST00000551320 GOLGA8QA0A0J9YX86 632 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 GOLGA8OA6NCC3 632 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 GOLGA8NF8WBI6 632 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 H7C417 338 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 VENTXO95231 258 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 PMS2P2O95744 297 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 BPGMP07738 259 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 ALDOCP09972 364 aaKnown RBP5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 CECR9P0C854 216 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 PATE4P0C8F1 98 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 SLC25A16P16260 332 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 PRPS1L1P21108 318 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 BGNP21810 368 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 APOBEC3AP31941 199 aaPredicted RBP5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 THBS4P35443 961 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 SERPINF1P36955 418 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 APOBEC1P41238 236 aaKnown RBP5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 MAGEA8P43361 318 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 PDLIM4P50479 330 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 IDH3GP51553 393 aaPredicted RBP5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 H3F3AP84243 136 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 NPRL3Q12980 569 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 CHI3L2Q15782 390 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 NKPD1Q17RQ9 610 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 TBRG1Q3YBR2 411 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 FAM174BQ3ZCQ3 159 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 PHYHD1Q5SRE7 291 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 MRPL2Q5T653 305 aaKnown RBP5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 CARD17Q5XLA6 110 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 SAXO2Q658L1 398 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 FAM166AQ6J272 317 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 KRT80Q6KB66 452 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 NIPAL3Q6P499 406 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 DEF8Q6ZN54 512 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 ZNF836Q6ZNA1 936 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 GRINAQ7Z429 371 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 COMTD1Q86VU5 262 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 FAM71CQ8NEG0 241 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 PIGXQ8TBF5 258 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 METTL2AQ96IZ6 378 aaKnown RBP5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 NUF2Q9BZD4 464 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 DPY30Q9C005 99 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 IQCGQ9H095 443 aaKnown RBP5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 NELFAQ9H3P2 528 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 WDR55Q9H6Y2 383 aaPredicted RBP5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 L2HGDHQ9H9P8 463 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 NOX3Q9HBY0 568 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 GP6Q9HCN6 339 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 ATAD3AQ9NVI7 634 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 TMEM181Q9P2C4 612 aa5.93□□□□□ -1.46
PRPF40B-214ENST00000551320 MALT1Q9UDY8 824 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms