RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 OR4F4Q96R69 305 aa8□□□□□ -1.13
YBX3-211ENST00000541351 CPNE1Q99829 537 aa8□□□□□ -1.13
YBX3-211ENST00000541351 EGLN1Q9GZT9 426 aa8□□□□□ -1.13
YBX3-211ENST00000541351 QRSL1Q9H0R6 528 aaKnown RBP8□□□□□ -1.13
YBX3-211ENST00000541351 VPS11Q9H270 941 aa8□□□□□ -1.13
YBX3-211ENST00000541351 DPAGT1Q9H3H5 408 aa8□□□□□ -1.13
YBX3-211ENST00000541351 GLIPR2Q9H4G4 154 aa8□□□□□ -1.13
YBX3-211ENST00000541351 NANOGQ9H9S0 305 aa8□□□□□ -1.13
YBX3-211ENST00000541351 SEC61A2Q9H9S3 476 aa8□□□□□ -1.13
YBX3-211ENST00000541351 PALMDQ9NP74 551 aa8□□□□□ -1.13
YBX3-211ENST00000541351 DUSP22Q9NRW4 184 aa8□□□□□ -1.13
YBX3-211ENST00000541351 ACER3Q9NUN7 267 aa8□□□□□ -1.13
YBX3-211ENST00000541351 TAAR3PQ9P1P4 343 aa8□□□□□ -1.13
YBX3-211ENST00000541351 PCDHGB4Q9UN71 923 aa8□□□□□ -1.13
YBX3-211ENST00000541351 MTO1Q9Y2Z2 717 aaKnown RBP8□□□□□ -1.13
YBX3-211ENST00000541351 CAPN6Q9Y6Q1 641 aa8□□□□□ -1.13
YBX3-211ENST00000541351 EPPK1P58107 5090 aaKnown RBP7.99□□□□□ -1.13
YBX3-211ENST00000541351 IGHV3OR16-10A0A075B7F0 116 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 K7EIL1 84 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 RAD51CO43502 376 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 BANF1O75531 89 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 VAMP5O95183 116 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 TGDSO95455 350 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 PDYNP01213 254 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 F13BP05160 661 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 KRT16P08779 473 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 CELA3BP08861 270 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 BCKDHAP12694 445 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 UQCRC2P22695 453 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 IVDP26440 423 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 STX2P32856 288 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 CRHR1P34998 444 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 SPRP35270 261 aaPredicted RBP7.99□□□□□ -1.13
YBX3-211ENST00000541351 HTR3AP46098 478 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 ASMTP46597 345 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 ZNF763Q0D2J5 394 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 C2orf80Q0P641 193 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 PDE7AQ13946 482 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 CASC10Q5T4H9 136 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 PRAMEF8Q5VWM4 474 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 PRAMEF7Q5VXH5 474 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 ZNF563Q8TA94 476 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 ADAMTS15Q8TE58 950 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 STACQ99469 402 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 THUMPD3Q9BV44 507 aaKnown RBP7.99□□□□□ -1.13
YBX3-211ENST00000541351 LINC00470Q9BZP3 86 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 LRCH1Q9Y2L9 728 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 COL7A1Q02388 2944 aa7.99□□□□□ -1.13
YBX3-211ENST00000541351 MDFIC2A0A1B0GVS7 189 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 TRAPPC2LH3BP13 241 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 OR7A17O14581 309 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 CYP7B1O75881 506 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 MELTFP08582 738 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 ANXA4P09525 319 aaPredicted RBP7.98□□□□□ -1.13
YBX3-211ENST00000541351 DRD4P21917 467 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 ARL4CP56559 192 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 EGR3Q06889 387 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 HSPB3Q12988 150 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 DUSP5Q16690 384 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 GSG1Q2KHT4 349 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 TMEM155Q4W5P6 130 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 TMEM225Q6GV28 225 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 CAVIN1Q6NZI2 390 aaKnown RBP7.98□□□□□ -1.13
YBX3-211ENST00000541351 FRRS1Q6ZNA5 592 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 ZNF771Q7L3S4 317 aaPredicted RBP7.98□□□□□ -1.13
YBX3-211ENST00000541351 GRINAQ7Z429 371 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 ZAR1Q86SH2 424 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 GPAT4Q86UL3 456 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 MDP1Q86V88 176 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 JAZF1Q86VZ6 243 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 IGDCC3Q8IVU1 814 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 OR9K2Q8NGE7 335 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 CDC26Q8NHZ8 85 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 MUC7Q8TAX7 377 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 SYNPRQ8TBG9 265 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 KLHDC3Q9BQ90 382 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 PATZ1Q9HBE1 687 aaKnown RBP7.98□□□□□ -1.13
YBX3-211ENST00000541351 GIN1Q9NXP7 522 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 CPSF2Q9P2I0 782 aaKnown RBP7.98□□□□□ -1.13
YBX3-211ENST00000541351 REXO2Q9Y3B8 237 aaKnown RBP7.98□□□□□ -1.13
YBX3-211ENST00000541351 GPR45Q9Y5Y3 372 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 TEX264Q9Y6I9 313 aa7.98□□□□□ -1.13
YBX3-211ENST00000541351 RPL36A-HNRNPH2H7BZ11 118 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 DNALI1O14645 258 aaPredicted RBP7.97□□□□□ -1.13
YBX3-211ENST00000541351 PDPK1O15530 556 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 ENTPD5O75356 428 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 TSPAN9O75954 239 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 RAB36O95755 333 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 GPIP06744 558 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 ACP2P11117 423 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 TGFBR2P37173 567 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 SLC6A9P48067 706 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 ROR2Q01974 943 aaKnown RBP7.97□□□□□ -1.13
YBX3-211ENST00000541351 TRAF3Q13114 568 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 ALKBH6Q3KRA9 238 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 HP1BP3Q5SSJ5 553 aaPredicted RBP7.97□□□□□ -1.13
YBX3-211ENST00000541351 CCNJQ5T5M9 372 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 PGBD2Q6P3X8 592 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 Q6ZSV7 163 aa7.97□□□□□ -1.13
YBX3-211ENST00000541351 MYPOPQ86VE0 399 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms