RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 FARSAQ9Y285 508 aaKnown RBP20.34■□□□□ 0.85
HOMER3-204ENST00000539827 SLC6A5Q9Y345 797 aa20.34■□□□□ 0.85
HOMER3-204ENST00000539827 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.33■□□□□ 0.84
HOMER3-204ENST00000539827 OR6C68A6NDL8 312 aa20.33■□□□□ 0.84
HOMER3-204ENST00000539827 SHISA8B8ZZ34 492 aa20.33■□□□□ 0.84
HOMER3-204ENST00000539827 IDH3BO43837 385 aa20.33■□□□□ 0.84
HOMER3-204ENST00000539827 NPIPB7O75200 414 aa20.33■□□□□ 0.84
HOMER3-204ENST00000539827 CD63P08962 238 aa20.33■□□□□ 0.84
HOMER3-204ENST00000539827 CASP3P42574 277 aa20.33■□□□□ 0.84
HOMER3-204ENST00000539827 HTR3AP46098 478 aa20.33■□□□□ 0.84
HOMER3-204ENST00000539827 SUMO3P55854 103 aaPredicted RBP20.33■□□□□ 0.84
HOMER3-204ENST00000539827 LEG1Q6P5S2 330 aa20.33■□□□□ 0.84
HOMER3-204ENST00000539827 LSM14AQ8ND56 463 aaKnown RBP20.33■□□□□ 0.84
HOMER3-204ENST00000539827 ZNRF4Q8WWF5 429 aa20.33■□□□□ 0.84
HOMER3-204ENST00000539827 ST8SIA1Q92185 356 aa20.33■□□□□ 0.84
HOMER3-204ENST00000539827 WIF1Q9Y5W5 379 aa20.33■□□□□ 0.84
HOMER3-204ENST00000539827 CPAMD8Q8IZJ3 1885 aa20.33■□□□□ 0.84
HOMER3-204ENST00000539827 DAPL1A0PJW8 107 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 SBK2P0C263 348 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 CDKN2AP42771 156 aaKnown RBP20.32■□□□□ 0.84
HOMER3-204ENST00000539827 CRYBB2P43320 205 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 HES3Q5TGS1 186 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 MAMDC2Q7Z304 686 aaPredicted RBP20.32■□□□□ 0.84
HOMER3-204ENST00000539827 FAM122BQ7Z309 247 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 KBTBD8Q8NFY9 601 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 SMPDL3BQ92485 455 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 TRMT61AQ96FX7 289 aaKnown RBP20.32■□□□□ 0.84
HOMER3-204ENST00000539827 ISG20L2Q9H9L3 353 aaKnown RBP20.32■□□□□ 0.84
HOMER3-204ENST00000539827 ISYNA1Q9NPH2 558 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 SDHAF3Q9NRP4 125 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 ASB6Q9NWX5 421 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 C11orf98E9PRG8 122 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 RAB40ALP0C0E4 278 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 TCEA1P23193 301 aaKnown RBP20.32■□□□□ 0.84
HOMER3-204ENST00000539827 PSMA1P25786 263 aaKnown RBP20.32■□□□□ 0.84
HOMER3-204ENST00000539827 FOXF1Q12946 379 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 MOGQ16653 247 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 ANKDD1AQ495B1 522 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 PRAMEF20Q5VT98 475 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 ZNF322Q6U7Q0 402 aaPredicted RBP20.32■□□□□ 0.84
HOMER3-204ENST00000539827 JAZF1Q86VZ6 243 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 ATP6V1C2Q8NEY4 427 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 OR52N1Q8NH53 320 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 STK35Q8TDR2 534 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 TMEM203Q969S6 136 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 ALG8Q9BVK2 526 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 STUB1Q9UNE7 303 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 YARS2Q9Y2Z4 477 aaKnown RBP20.32■□□□□ 0.84
HOMER3-204ENST00000539827 PCDHGB6Q9Y5F9 930 aa20.32■□□□□ 0.84
HOMER3-204ENST00000539827 AHSA1O95433 338 aa20.31■□□□□ 0.84
HOMER3-204ENST00000539827 RPS25P62851 125 aaKnown RBP20.31■□□□□ 0.84
HOMER3-204ENST00000539827 FAM69AQ5T7M9 428 aa20.31■□□□□ 0.84
HOMER3-204ENST00000539827 CROCCP3Q8IVE0 287 aa20.31■□□□□ 0.84
HOMER3-204ENST00000539827 UFD1Q92890 307 aa20.31■□□□□ 0.84
HOMER3-204ENST00000539827 TSPAN32Q96QS1 320 aa20.31■□□□□ 0.84
HOMER3-204ENST00000539827 ASPNQ9BXN1 380 aa20.31■□□□□ 0.84
HOMER3-204ENST00000539827 HAO2Q9NYQ3 351 aa20.31■□□□□ 0.84
HOMER3-204ENST00000539827 TAS2R5Q9NYW4 299 aa20.31■□□□□ 0.84
HOMER3-204ENST00000539827 TP53I11O14683 189 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 INHBBP09529 407 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 SPI1P17947 270 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 MSX1P28360 303 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 GRPRP30550 384 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 HCCSP53701 268 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 TUBA1BP68363 451 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 TPBGQ13641 420 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 TUBA1AQ71U36 451 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 KLBQ86Z14 1044 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 ASB15Q8WXK1 588 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 SLIRPQ9GZT3 109 aaKnown RBP20.3■□□□□ 0.84
HOMER3-204ENST00000539827 ZNF346Q9UL40 294 aaKnown RBP20.3■□□□□ 0.84
HOMER3-204ENST00000539827 CAB39Q9Y376 341 aaPredicted RBP20.3■□□□□ 0.84
HOMER3-204ENST00000539827 PCDHGA1Q9Y5H4 931 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 CHCHD2Q9Y6H1 151 aaPredicted RBP20.3■□□□□ 0.84
HOMER3-204ENST00000539827 MT-ATP6P00846 226 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 SDHAP31040 664 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 TRIP6Q15654 476 aaKnown RBP20.3■□□□□ 0.84
HOMER3-204ENST00000539827 CSRP2Q16527 193 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 OPN5Q6U736 354 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 RPS19BP1Q86WX3 136 aaKnown RBP20.3■□□□□ 0.84
HOMER3-204ENST00000539827 OR5J2Q8NH18 312 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 NMNAT2Q9BZQ4 307 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 NDEL1Q9GZM8 345 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 RERGLQ9H628 205 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 GRHPRQ9UBQ7 328 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 SSR3Q9UNL2 185 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 SDK2Q58EX2 2172 aa20.3■□□□□ 0.84
HOMER3-204ENST00000539827 IGLV3-32A0A0A0MS00 114 aa20.29■□□□□ 0.84
HOMER3-204ENST00000539827 FAM171A2A8MVW0 826 aa20.29■□□□□ 0.84
HOMER3-204ENST00000539827 H7C1C5 153 aa20.29■□□□□ 0.84
HOMER3-204ENST00000539827 APEHP13798 732 aaKnown RBP20.29■□□□□ 0.84
HOMER3-204ENST00000539827 IL11P20809 199 aa20.29■□□□□ 0.84
HOMER3-204ENST00000539827 OPRL1P41146 370 aa20.29■□□□□ 0.84
HOMER3-204ENST00000539827 APOBEC1P41238 236 aaKnown RBP20.29■□□□□ 0.84
HOMER3-204ENST00000539827 SSR4P51571 173 aa20.29■□□□□ 0.84
HOMER3-204ENST00000539827 BMXP51813 675 aa20.29■□□□□ 0.84
HOMER3-204ENST00000539827 ZNF41P51814 821 aaPredicted RBP20.29■□□□□ 0.84
HOMER3-204ENST00000539827 NUBP1P53384 320 aa20.29■□□□□ 0.84
HOMER3-204ENST00000539827 LCN6P62502 163 aa20.29■□□□□ 0.84
HOMER3-204ENST00000539827 RPS15P62841 145 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms