RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 IGHV3-9P01782 118 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 LOXP28300 417 aaPredicted RBP11.28□□□□□ -0.6
CLP1-202ENST00000525602 RPS5P46782 204 aaKnown RBP11.28□□□□□ -0.6
CLP1-202ENST00000525602 CDH12P55289 794 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 ITGADQ13349 1161 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 VEZF1Q14119 521 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 SWT1Q5T5J6 900 aaKnown RBP11.28□□□□□ -0.6
CLP1-202ENST00000525602 C5orf46Q6UWT4 87 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 PAMR1Q6UXH9 720 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 CASP12Q6UXS9 341 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 BHLHA15Q7RTS1 189 aaPredicted RBP11.28□□□□□ -0.6
CLP1-202ENST00000525602 ARPINQ7Z6K5 226 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 WFDC8Q8IUA0 241 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 RBM45Q8IUH3 476 aaKnown RBP11.28□□□□□ -0.6
CLP1-202ENST00000525602 MFSD8Q8NHS3 518 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 VANGL1Q8TAA9 524 aaPredicted RBP11.28□□□□□ -0.6
CLP1-202ENST00000525602 SLC26A7Q8TE54 656 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 RASSF5Q8WWW0 418 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 SLC38A4Q969I6 547 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 PIK3IP1Q96FE7 263 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 ALPK1Q96QP1 1244 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 MCHR1Q99705 422 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 SF3B5Q9BWJ5 86 aaKnown RBP11.28□□□□□ -0.6
CLP1-202ENST00000525602 CMTM6Q9NX76 183 aa11.28□□□□□ -0.6
CLP1-202ENST00000525602 ARID1AO14497 2285 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 TRAV36DV7A0A075B6V5 113 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 MRPL33O75394 65 aaKnown RBP11.27□□□□□ -0.61
CLP1-202ENST00000525602 LYZL6O75951 148 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 ATE1O95260 518 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 IGHV1-2P23083 117 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 GTF2E2P29084 291 aaKnown RBP11.27□□□□□ -0.61
CLP1-202ENST00000525602 ENTPD8Q5MY95 495 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 FAM69AQ5T7M9 428 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 FBXW9Q5XUX1 488 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 ZNF613Q6PF04 617 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 CPLX4Q7Z7G2 160 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 GPAT4Q86UL3 456 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 KRTAP1-3Q8IUG1 177 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 P3H2Q8IVL5 708 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 UBE2J2Q8N2K1 259 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 OR2T12Q8NG77 320 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 RNF217Q8TC41 542 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 TAAR8Q969N4 342 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 TMEM45BQ96B21 275 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 SLC25A36Q96CQ1 311 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 ZNF385AQ96PM9 386 aaKnown RBP11.27□□□□□ -0.61
CLP1-202ENST00000525602 HS3ST6Q96QI5 342 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 MALT1Q9UDY8 824 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 AP3M1Q9Y2T2 418 aa11.27□□□□□ -0.61
CLP1-202ENST00000525602 CSPG4Q6UVK1 2322 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.26□□□□□ -0.61
CLP1-202ENST00000525602 CPSF4LA6NMK7 179 aaKnown RBP11.26□□□□□ -0.61
CLP1-202ENST00000525602 HAX1O00165 279 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 KLF4O43474 513 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 CHP2O43745 196 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 OR2T1O43869 369 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 VAMP5O95183 116 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 PTNP21246 168 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 NUDT2P50583 147 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 LTBQ06643 244 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 LRRC23Q53EV4 343 aaPredicted RBP11.26□□□□□ -0.61
CLP1-202ENST00000525602 BEX5Q5H9J7 111 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 TMEM225Q6GV28 225 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 C8orf82Q6P1X6 216 aaPredicted RBP11.26□□□□□ -0.61
CLP1-202ENST00000525602 HACD2Q6Y1H2 254 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 TSPYL5Q86VY4 417 aaPredicted RBP11.26□□□□□ -0.61
CLP1-202ENST00000525602 SLC15A3Q8IY34 581 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 MICU2Q8IYU8 434 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 ZIC4Q8N9L1 334 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 CMTM5Q96DZ9 223 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 USB1Q9BQ65 265 aaKnown RBP11.26□□□□□ -0.61
CLP1-202ENST00000525602 TMEM43Q9BTV4 400 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 PCDHAC1Q9H158 963 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 EFCAB1Q9HAE3 211 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 ASB6Q9NWX5 421 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 GMPR2Q9P2T1 348 aaKnown RBP11.26□□□□□ -0.61
CLP1-202ENST00000525602 SEC14L4Q9UDX3 406 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 RASD1Q9Y272 281 aa11.26□□□□□ -0.61
CLP1-202ENST00000525602 PRR14LQ5THK1 2151 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 ELOVL7A1L3X0 281 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 M0R082 166 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 NME4O00746 187 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 LYPD3O95274 346 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 THY1P04216 161 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 TNFRSF1BP20333 461 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 PRDX6P30041 224 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 GRPRP30550 384 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 SLC7A2P52569 658 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 LIPEQ05469 1076 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 TAB1Q15750 504 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 STK11Q15831 433 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 TSPO2Q5TGU0 170 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 ALKBH2Q6NS38 261 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 SEZ6L2Q6UXD5 910 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 WDR88Q6ZMY6 472 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 CARM1Q86X55 608 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 ZNF433Q8N7K0 673 aaPredicted RBP11.25□□□□□ -0.61
CLP1-202ENST00000525602 OR6S1Q8NH40 331 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 ZNF417Q8TAU3 575 aa11.25□□□□□ -0.61
CLP1-202ENST00000525602 ADAMTS16Q8TE57 1224 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms