RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 KTI12Q96EK9 354 aaPredicted RBP8.38□□□□□ -1.07
CLK4-209ENST00000521621 WFDC6Q9BQY6 131 aa8.38□□□□□ -1.07
CLK4-209ENST00000521621 TMEM204Q9BSN7 226 aa8.38□□□□□ -1.07
CLK4-209ENST00000521621 ARL8BQ9NVJ2 186 aa8.38□□□□□ -1.07
CLK4-209ENST00000521621 B3GAT1Q9P2W7 334 aa8.38□□□□□ -1.07
CLK4-209ENST00000521621 NOSIPQ9Y314 301 aaKnown RBP8.38□□□□□ -1.07
CLK4-209ENST00000521621 NOX1Q9Y5S8 564 aa8.38□□□□□ -1.07
CLK4-209ENST00000521621 MYO7BQ6PIF6 2116 aa8.38□□□□□ -1.07
CLK4-209ENST00000521621 RELNP78509 3460 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 CCT8L1PA6NM43 557 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 M0R3H8 397 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 ZNF432O94892 652 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 AQP1P29972 269 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 IFNA8P32881 189 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 NR1H2P55055 460 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 SIRPAP78324 504 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 ST3GAL3Q11203 375 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 TAF11Q15544 211 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 OR7A5Q15622 319 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 IFI44LQ53G44 452 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 TIMM23BQ5SRD1 257 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 OR7E24Q6IFN5 339 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 PXKQ7Z7A4 578 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 EPHX4Q8IUS5 362 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 ATP6V1C2Q8NEY4 427 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 APH1AQ96BI3 265 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 MUS81Q96NY9 551 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 ZNF300Q96RE9 604 aaPredicted RBP8.37□□□□□ -1.07
CLK4-209ENST00000521621 SEPHS2Q99611 448 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 ASPNQ9BXN1 380 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 KLHL4Q9C0H6 718 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 CACNA1CQ13936 2221 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 PTPN13Q12923 2485 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 LRRK2Q5S007 2527 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 PRSS23O95084 383 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 OPN1LWP04000 364 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 ASAH2BP0C7U1 165 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 PRF1P14222 555 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 ZNF133P52736 654 aaPredicted RBP8.37□□□□□ -1.07
CLK4-209ENST00000521621 ZNF74Q16587 644 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 PLXDC2Q6UX71 529 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 PIWIL3Q7Z3Z3 882 aaKnown RBP8.37□□□□□ -1.07
CLK4-209ENST00000521621 ZNF433Q8N7K0 673 aaPredicted RBP8.37□□□□□ -1.07
CLK4-209ENST00000521621 TMEM99Q8N816 258 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 PIK3C3Q8NEB9 887 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 STX18Q9P2W9 335 aaKnown RBP8.37□□□□□ -1.07
CLK4-209ENST00000521621 A4GNTQ9UNA3 340 aa8.37□□□□□ -1.07
CLK4-209ENST00000521621 ARPC4-TTLL3A0A0A6YYG9 625 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 MRPL33O75394 65 aaKnown RBP8.36□□□□□ -1.07
CLK4-209ENST00000521621 SMNDC1O75940 238 aaKnown RBP eCLIP8.36□□□□□ -1.076e-6■■■■□ 20
CLK4-209ENST00000521621 OPN1SWP03999 348 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 HRGP04196 525 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 PAX1P15863 534 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 FAM27E3Q08E93 113 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 SEZ6L2Q6UXD5 910 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 LUZP2Q86TE4 346 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 CCDC36Q8IYA8 594 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 OR5J2Q8NH18 312 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 PIP5K1AQ99755 562 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 NGBQ9NPG2 151 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 TAS2R16Q9NYV7 291 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 RIMS3Q9UJD0 308 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 DEFB108AA8MXU0 73 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 MS4A18H0YCH9 400 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 PLPP3O14495 311 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 GSTA4O15217 222 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 IGHMP01871 453 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 MT-ND1P03886 318 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 IFNW1P05000 195 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 THBDP07204 575 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 LTBQ06643 244 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 MS4A18Q3C1V0 323 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 NRN1LQ496H8 165 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 BEX5Q5H9J7 111 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 BHLHA15Q7RTS1 189 aaPredicted RBP8.36□□□□□ -1.07
CLK4-209ENST00000521621 HDDC2Q7Z4H3 204 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 WFIKKN1Q96NZ8 548 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 FAM107BQ9H098 131 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 DENND2DQ9H6A0 471 aaPredicted RBP8.36□□□□□ -1.07
CLK4-209ENST00000521621 MAGIXQ9H6Y5 334 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 ACTR3BQ9P1U1 418 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 SLC7A7Q9UM01 511 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 USP22Q9UPT9 525 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 AMDHD2Q9Y303 409 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 ENPP4Q9Y6X5 453 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 SVILO95425 2214 aa8.36□□□□□ -1.07
CLK4-209ENST00000521621 IGHV3-15A0A0B4J1V0 119 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 A0A1W2PRQ8 180 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 AKR7A3O95154 331 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 T-ENOLP0DO92 83 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 ITGA2P17301 1181 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 KLK2P20151 261 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 GTF2E2P29084 291 aaKnown RBP8.35□□□□□ -1.07
CLK4-209ENST00000521621 MPGP29372 298 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 GRPRP30550 384 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 NTF4P34130 210 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 RPS5P46782 204 aaKnown RBP8.35□□□□□ -1.07
CLK4-209ENST00000521621 SLC9A3P48764 834 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 HOXC5Q00444 222 aa8.35□□□□□ -1.07
CLK4-209ENST00000521621 PRKCDQ05655 676 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms