RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 MAN2C1Q9NTJ4 1040 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 RLIMQ9NVW2 624 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 FKBP14Q9NWM8 211 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 KIF17Q9P2E2 1029 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 REV1Q9UBZ9 1251 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 RNF6Q9Y252 685 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 FAM215AQ9Y5M1 114 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 COMMD3-BMI1R4GMX3 469 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 HECTD1Q9ULT8 2610 aa7.49□□□□□ -1.21
CCL28-204ENST00000514421 TRBV4-1A0A0J9YWV2 114 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 HSPB2A8KAH6 182 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 SHISA8B8ZZ34 492 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 H3BML4 177 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 ETV2O00321 342 aaPredicted RBP7.48□□□□□ -1.21
CCL28-204ENST00000514421 EFNA2O43921 213 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 FMO6PO60774 539 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 WBP4O75554 376 aaKnown RBP7.48□□□□□ -1.21
CCL28-204ENST00000514421 SEC14L2O76054 403 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 CLDN14O95500 239 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 GASTP01350 101 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 IL2RAP01589 272 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 NID1P14543 1247 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 PRKCAP17252 672 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 PCMT1P22061 227 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 FUT4P22083 530 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 DCKP27707 260 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 CEACAM8P31997 349 aaPredicted RBP7.48□□□□□ -1.21
CCL28-204ENST00000514421 SLC6A8P48029 635 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 CCR4P51679 360 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 SUCLG1P53597 346 aaKnown RBP7.48□□□□□ -1.21
CCL28-204ENST00000514421 SH3BGRP55822 239 aaPredicted RBP7.48□□□□□ -1.21
CCL28-204ENST00000514421 CLDN15P56746 228 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 EEF1A1P68104 462 aaKnown RBP7.48□□□□□ -1.21
CCL28-204ENST00000514421 SKP2Q13309 424 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 QPRTQ15274 297 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 SEC23BQ15437 767 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 TOMM34Q15785 309 aaPredicted RBP7.48□□□□□ -1.21
CCL28-204ENST00000514421 HSPB2Q16082 182 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 NDUFAF6Q330K2 333 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 ACSF3Q4G176 576 aaPredicted RBP7.48□□□□□ -1.21
CCL28-204ENST00000514421 ZNF311Q5JNZ3 666 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 ENTPD8Q5MY95 495 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 SLC25A30Q5SVS4 291 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 PDSS1Q5T2R2 415 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 KLHL17Q6TDP4 642 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 SEM1Q6ZVN7 128 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 MAMDC2Q7Z304 686 aaPredicted RBP7.48□□□□□ -1.21
CCL28-204ENST00000514421 HMGN2P46Q86SG4 172 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 ADGRE4PQ86SQ3 457 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 RBM45Q8IUH3 476 aaKnown RBP7.48□□□□□ -1.21
CCL28-204ENST00000514421 ZNF440Q8IYI8 595 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 ENTHD1Q8IYW4 607 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 SPARTQ8N0X7 666 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 TMCO5AQ8N6Q1 288 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 FAM71CQ8NEG0 241 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 OR6T1Q8NGN1 323 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 OR13F1Q8NGS4 319 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 SLC7A13Q8TCU3 470 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 CA5BP1Q8WTZ4 195 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 APH1BQ8WW43 257 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 ST8SIA1Q92185 356 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 CNOT9Q92600 299 aaKnown RBP7.48□□□□□ -1.21
CCL28-204ENST00000514421 WNT2BQ93097 391 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 SLC35B4Q969S0 331 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 MRGPRX4Q96LA9 322 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 COL12A1Q99715 3063 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 KLHDC3Q9BQ90 382 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 RIBC2Q9H4K1 309 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 ZNF556Q9HAH1 456 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 CCNB1IP1Q9NPC3 277 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 PAK1IP1Q9NWT1 392 aaPredicted RBP7.48□□□□□ -1.21
CCL28-204ENST00000514421 PAQR5Q9NXK6 330 aaPredicted RBP7.48□□□□□ -1.21
CCL28-204ENST00000514421 PTTG2Q9NZH5 202 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 GMPPBQ9Y5P6 360 aa7.48□□□□□ -1.21
CCL28-204ENST00000514421 KLF2Q9Y5W3 355 aaPredicted RBP7.48□□□□□ -1.21
CCL28-204ENST00000514421 A0A0G2JNJ9 132 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 MBD3L4A6NDZ8 208 aaPredicted RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 MBD3L3A6NE82 208 aaPredicted RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 MBD3L5A6NJ08 208 aaPredicted RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 CLDN24A6NM45 220 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 GJE1A6NN92 205 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 CLCA1A8K7I4 914 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 MPZL2O60487 215 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 TPST2O60704 377 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 TOXO94900 526 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 RCBTB2O95199 551 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 NTN1O95631 604 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 OPN1LWP04000 364 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 TP53P04637 393 aaPredicted RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 GP1BBP13224 206 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 OSMP13725 252 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 FKBP2P26885 142 aaKnown RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 CHRNB4P30926 498 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 APOBEC1P41238 236 aaKnown RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 YAP1P46937 504 aaKnown RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 IDH2P48735 452 aaKnown RBP7.47□□□□□ -1.21
CCL28-204ENST00000514421 ZNF136P52737 540 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 DLX5P56178 289 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 CLDN20P56880 219 aa7.47□□□□□ -1.21
CCL28-204ENST00000514421 SGCBQ16585 318 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms