RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 ARL16Q0P5N6 197 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 SMN1Q16637 294 aaKnown RBP10.09□□□□□ -0.79
CPNE4-209ENST00000512055 HENMT1Q5T8I9 393 aaKnown RBP10.09□□□□□ -0.79
CPNE4-209ENST00000512055 HEPHL1Q6MZM0 1159 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 ENTHD1Q8IYW4 607 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 GATSQ8NAP1 163 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 STEAP2Q8NFT2 490 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 OR1M1Q8NGA1 313 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 CHFRQ96EP1 664 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 MMABQ96EY8 250 aaPredicted RBP10.09□□□□□ -0.79
CPNE4-209ENST00000512055 SERINC1Q9NRX5 453 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 OLAHQ9NV23 265 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 ATXN7L1Q9ULK2 861 aaPredicted RBP10.09□□□□□ -0.79
CPNE4-209ENST00000512055 CEPT1Q9Y6K0 416 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 SRCAPQ6ZRS2 3230 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 PRRT4C9JH25 899 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 SOX30O94993 753 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 MT-ND4LP03901 98 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 THBS1P07996 1170 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 TMEM11P17152 192 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 CNR1P21554 472 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 NFYAP23511 347 aaPredicted RBP10.09□□□□□ -0.79
CPNE4-209ENST00000512055 KRTDAPP60985 99 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 ECH1Q13011 328 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 HNF4GQ14541 408 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 ZNF77Q15935 545 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 NHSL2Q5HYW2 709 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 KCTD18Q6PI47 426 aaPredicted RBP10.09□□□□□ -0.79
CPNE4-209ENST00000512055 TSSK4Q6SA08 328 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 THAP4Q8WY91 577 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 MARC2Q969Z3 335 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 NMNAT1Q9HAN9 279 aaPredicted RBP10.09□□□□□ -0.79
CPNE4-209ENST00000512055 Q9N2J8 555 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 PARD6AQ9NPB6 346 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 H2BFMP0C1H6 154 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 PCK2Q16822 640 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 ASTLQ6HA08 431 aaPredicted RBP10.09□□□□□ -0.79
CPNE4-209ENST00000512055 FIGLAQ6QHK4 219 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 CSNK1A1LQ8N752 337 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 C15orf54Q8N8G6 183 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 PLA2G15Q8NCC3 412 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 SLC24A4Q8NFF2 622 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 OR4K5Q8NGD3 323 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 OR2D3Q8NGH3 330 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 OR51A7Q8NH64 312 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 TMEM18Q96B42 140 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 TECTBQ96PL2 329 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 RBP7Q96R05 134 aa10.09□□□□□ -0.79
CPNE4-209ENST00000512055 INSM2Q96T92 566 aaPredicted RBP10.09□□□□□ -0.79
CPNE4-209ENST00000512055 EXOGQ9Y2C4 368 aaKnown RBP10.09□□□□□ -0.79
CPNE4-209ENST00000512055 ZNF816-ZNF321PA0A0X1KG74 233 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 J3KTA2 159 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 ADRB1P08588 477 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 GPR4P46093 362 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 RANP62826 216 aaKnown RBP10.08□□□□□ -0.8
CPNE4-209ENST00000512055 TAF9Q16594 264 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 MICAQ29983 383 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 RBMS3Q6XE24 437 aaKnown RBP10.08□□□□□ -0.8
CPNE4-209ENST00000512055 CBLL1Q75N03 491 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 ACOT4Q8N9L9 421 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 MFSD9Q8NBP5 474 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 OR9A2Q8NGT5 310 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 RNF141Q8WVD5 230 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 YIPF5Q969M3 257 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SLCO4A1Q96BD0 722 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 FOXN4Q96NZ1 517 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SEMA4CQ9C0C4 833 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 OR8D2Q9GZM6 311 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 NAA50Q9GZZ1 169 aaKnown RBP10.08□□□□□ -0.8
CPNE4-209ENST00000512055 BABAM2Q9NXR7 383 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 NLGN3Q9NZ94 848 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 CLCF1Q9UBD9 225 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SLC7A11Q9UPY5 501 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 ZNF736B4DX44 427 aaPredicted RBP10.08□□□□□ -0.8
CPNE4-209ENST00000512055 FXYD1O00168 92 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 DVL2O14641 736 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 MPPED1O15442 326 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 LILRB3O75022 631 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SEC14L2O76054 403 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 RPS15AP62244 130 aaKnown RBP10.08□□□□□ -0.8
CPNE4-209ENST00000512055 RAP1AP62834 184 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SHC2P98077 582 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SLX4IPQ5VYV7 408 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 TBPL2Q6SJ96 375 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 PTRH1Q86Y79 214 aaKnown RBP10.08□□□□□ -0.8
CPNE4-209ENST00000512055 LRR1Q96L50 414 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 TOLLIPQ9H0E2 274 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 B3GNT2Q9NY97 397 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 PPT2Q9UMR5 302 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 NEU3Q9UQ49 428 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SOX1O00570 391 aaPredicted RBP10.08□□□□□ -0.8
CPNE4-209ENST00000512055 OR2T1O43869 369 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 HMGN2P05204 90 aaKnown RBP10.08□□□□□ -0.8
CPNE4-209ENST00000512055 MMP7P09237 267 aaPredicted RBP10.08□□□□□ -0.8
CPNE4-209ENST00000512055 OMGP23515 440 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SPRED1Q7Z699 444 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 ZNF573Q86YE8 665 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SLC2A12Q8TD20 617 aa10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SMAP2Q8WU79 429 aaPredicted RBP10.08□□□□□ -0.8
CPNE4-209ENST00000512055 SLC25A31Q9H0C2 315 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms