RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 ZNF83P51522 516 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 CDH12P55289 794 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 NKX6-1P78426 367 aaPredicted RBP11.69□□□□□ -0.54
RNF4-215ENST00000511843 SPOCK1Q08629 439 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 RBBP4Q09028 425 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 NPTX1Q15818 432 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 GABRA6Q16445 453 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 C6orf89Q6UWU4 347 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 CREB3L2Q70SY1 520 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 TSPYL5Q86VY4 417 aaPredicted RBP11.69□□□□□ -0.54
RNF4-215ENST00000511843 EPHX4Q8IUS5 362 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 OR6T1Q8NGN1 323 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 MFSD8Q8NHS3 518 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 ZNF317Q96PQ6 595 aaPredicted RBP11.69□□□□□ -0.54
RNF4-215ENST00000511843 MCHR1Q99705 422 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 ARHGDIGQ99819 225 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 TMUB1Q9BVT8 246 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 MED4Q9NPJ6 270 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 TAS2R16Q9NYV7 291 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 KLHL14Q9P2G3 628 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 GMPR2Q9P2T1 348 aaKnown RBP11.69□□□□□ -0.54
RNF4-215ENST00000511843 UPB1Q9UBR1 384 aa11.69□□□□□ -0.54
RNF4-215ENST00000511843 USF3Q68DE3 2245 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 ACANP16112 2415 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 A0A0B4J2E0 115 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 A0A1B0GX12 115 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 CPSF4LA6NMK7 179 aaKnown RBP11.68□□□□□ -0.54
RNF4-215ENST00000511843 LRRN3E7EW58 273 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 M0R082 166 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 PDLIM1O00151 329 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 SMPD2O60906 423 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 LGI1O95970 557 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 CD3EP07766 207 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 TNFRSF1BP20333 461 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 GRPRP30550 384 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 HOXC12P31275 282 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 SLC25A3Q00325 362 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 CYLC2Q14093 348 aaPredicted RBP11.68□□□□□ -0.54
RNF4-215ENST00000511843 NRF1Q16656 503 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 VMACQ2NL98 169 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 TIMM23BQ5SRD1 257 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 NIPAL3Q6P499 406 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 ULK3Q6PHR2 472 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 C20orf204Q6ZNR8 217 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 LINGO2Q7L985 606 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 RANBP3LQ86VV4 465 aaPredicted RBP11.68□□□□□ -0.54
RNF4-215ENST00000511843 CALHM3Q86XJ0 350 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 ZNF417Q8TAU3 575 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 DNAJA4Q8WW22 397 aaPredicted RBP11.68□□□□□ -0.54
RNF4-215ENST00000511843 SLC38A4Q969I6 547 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 TMEM45BQ96B21 275 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 RCN3Q96D15 328 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 MUCL1Q96DR8 90 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 ALKBH3Q96Q83 286 aaPredicted RBP11.68□□□□□ -0.54
RNF4-215ENST00000511843 ZNF587Q96SQ5 575 aaPredicted RBP11.68□□□□□ -0.54
RNF4-215ENST00000511843 SF3B5Q9BWJ5 86 aaKnown RBP11.68□□□□□ -0.54
RNF4-215ENST00000511843 SLCO5A1Q9H2Y9 848 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 ESRP2Q9H6T0 727 aaKnown RBP11.68□□□□□ -0.54
RNF4-215ENST00000511843 TMEM27Q9HBJ8 222 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 PARPBPQ9NWS1 579 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 CAPN7Q9Y6W3 813 aa11.68□□□□□ -0.54
RNF4-215ENST00000511843 ALPK2Q86TB3 2170 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 TRAV36DV7A0A075B6V5 113 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 A0A087WUJ7 227 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 THY1P04216 161 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 GTF2E2P29084 291 aaKnown RBP11.67□□□□□ -0.54
RNF4-215ENST00000511843 CLDN17P56750 224 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 IL1RL1Q01638 556 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 LTBQ06643 244 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 Q5PR19 223 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 FAM69AQ5T7M9 428 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 WDR88Q6ZMY6 472 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 WDR31Q8NA23 367 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 SLC26A7Q8TE54 656 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 IGFBPL1Q8WX77 278 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 PIGTQ969N2 578 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 SLC47A1Q96FL8 570 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 MOGAT1Q96PD6 335 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 ECSITQ9BQ95 431 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 C12orf10Q9HB07 376 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 NGBQ9NPG2 151 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 SELENONQ9NZV5 590 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 B3GAT1Q9P2W7 334 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 PRDM4Q9UKN5 801 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 LAMP3Q9UQV4 416 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 RASD1Q9Y272 281 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 SLC25A15Q9Y619 301 aa11.67□□□□□ -0.54
RNF4-215ENST00000511843 BBIP1A8MTZ0 92 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 SHISA9B4DS77 424 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 M0R1B8 84 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 ABCD4O14678 606 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 SHOX2O60902 331 aaPredicted RBP11.66□□□□□ -0.54
RNF4-215ENST00000511843 UPK3AO75631 287 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 KRT33AO76009 404 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 LYPD3O95274 346 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 HPRP00739 348 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 BGLAPP02818 100 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 HLA-DOBP13765 273 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 MAPRE2Q15555 327 aa11.66□□□□□ -0.54
RNF4-215ENST00000511843 ZNF672Q499Z4 452 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms