RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 POU1F1P28069 291 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 UQCRC1P31930 480 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 EGR4Q05215 589 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 SELENBP1Q13228 472 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 FHL1Q13642 323 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 INAQ16352 499 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 SGCBQ16585 318 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 RNLSQ5VYX0 342 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 TIGD3Q6B0B8 471 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 DESI1Q6ICB0 168 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 LAIR2Q6ISS4 152 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 PRSS48Q7RTY5 328 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 ADGRG3Q86Y34 549 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 GID4Q8IVV7 300 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 PSD4Q8NDX1 1056 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 FDCSPQ8NFU4 85 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 OR8D4Q8NGM9 314 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 OR5M3Q8NGP4 307 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 MFSD8Q8NHS3 518 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 FCGR1BQ92637 280 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 MYDGFQ969H8 173 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 SNX18Q96RF0 628 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 TUBA1CQ9BQE3 449 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 UTP23Q9BRU9 249 aaKnown RBP8.23□□□□□ -1.09
NR1I3-228ENST00000511676 TSSK6Q9BXA6 273 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 PLA2G12AQ9BZM1 189 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 FAM192AQ9GZU8 254 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 GALNT9Q9HCQ5 603 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 FANCFQ9NPI8 374 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 NANSQ9NR45 359 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 MRPS18AQ9NVS2 196 aaKnown RBP8.23□□□□□ -1.09
NR1I3-228ENST00000511676 QPCTLQ9NXS2 382 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 ZNF226Q9NYT6 803 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 PSORS1C1Q9UIG5 152 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 KLHL21Q9UJP4 597 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.23□□□□□ -1.09
NR1I3-228ENST00000511676 BOKQ9UMX3 212 aaPredicted RBP8.23□□□□□ -1.09
NR1I3-228ENST00000511676 TMED7Q9Y3B3 224 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 RPL36Q9Y3U8 105 aaKnown RBP8.23□□□□□ -1.09
NR1I3-228ENST00000511676 PCDHGB5Q9Y5G0 923 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 COL12A1Q99715 3063 aa8.23□□□□□ -1.09
NR1I3-228ENST00000511676 SMIM31A0A1B0GVY4 71 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 KDM4EB2RXH2 506 aaPredicted RBP8.22□□□□□ -1.09
NR1I3-228ENST00000511676 SURF4O15260 269 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 PRODHO43272 600 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 TXNDC12O95881 172 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 IFNGP01579 166 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 BGLAPP02818 100 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 HIST1H2ABP04908 130 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 CCL3P10147 92 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 JUNBP17275 347 aaPredicted RBP8.22□□□□□ -1.09
NR1I3-228ENST00000511676 FUT1P19526 365 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 CNR1P21554 472 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 SRD5A2P31213 254 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 SLC15A1P46059 708 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 RNF144AP50876 292 aaPredicted RBP8.22□□□□□ -1.09
NR1I3-228ENST00000511676 FXYD6P3P58550 94 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 MFAP5Q13361 173 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 TUBA3CQ13748 450 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 TOMM34Q15785 309 aaPredicted RBP8.22□□□□□ -1.09
NR1I3-228ENST00000511676 ZNF239Q16600 458 aaKnown RBP8.22□□□□□ -1.09
NR1I3-228ENST00000511676 TUSC1Q2TAM9 212 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 EIF2S3LQ2VIR3 472 aaKnown RBP8.22□□□□□ -1.09
NR1I3-228ENST00000511676 NADK2Q4G0N4 442 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 ATP1A1-AS1Q5TC04 95 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 C1orf140Q5VVS0 124 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 NXNL2Q5VZ03 156 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 SLC6A19Q695T7 634 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 GPR139Q6DWJ6 353 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 RPUSD3Q6P087 351 aaKnown RBP8.22□□□□□ -1.09
NR1I3-228ENST00000511676 ISLR2Q6UXK2 745 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 HIST3H2AQ7L7L0 130 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 CCDC103Q8IW40 242 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 BEST3Q8N1M1 668 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 WDSUB1Q8N9V3 476 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 OR1J4Q8NGS1 313 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 CNIH3Q8TBE1 160 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 APH1BQ8WW43 257 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 HIST1H2ACQ93077 130 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 KCTD12Q96CX2 325 aaKnown RBP8.22□□□□□ -1.09
NR1I3-228ENST00000511676 PLEKHA8Q96JA3 519 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 FAM173AQ9BQD7 235 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 DSN1Q9H410 356 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 EGLN3Q9H6Z9 239 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 PROK2Q9HC23 129 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 MCCC2Q9HCC0 563 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 NRIP3Q9NQ35 241 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 MRPL39Q9NYK5 338 aaKnown RBP8.22□□□□□ -1.09
NR1I3-228ENST00000511676 STMN3Q9NZ72 180 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 KLF13Q9Y2Y9 288 aaPredicted RBP8.22□□□□□ -1.09
NR1I3-228ENST00000511676 HDGFL3Q9Y3E1 203 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 SNX5Q9Y5X3 404 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 NOTCH2Q04721 2471 aa8.22□□□□□ -1.09
NR1I3-228ENST00000511676 SPTAN1Q13813 2472 aaKnown RBP8.22□□□□□ -1.09
NR1I3-228ENST00000511676 OR5H15A6NDH6 313 aa8.21□□□□□ -1.1
NR1I3-228ENST00000511676 A6NHS1 94 aa8.21□□□□□ -1.1
NR1I3-228ENST00000511676 A6NL46 340 aa8.21□□□□□ -1.1
NR1I3-228ENST00000511676 GJE1A6NN92 205 aa8.21□□□□□ -1.1
NR1I3-228ENST00000511676 RIIAD1A6NNX1 92 aa8.21□□□□□ -1.1
NR1I3-228ENST00000511676 FTCDNL1E5RQL4 147 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms