RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 GPAT4Q86UL3 456 aa9.05□□□□□ -0.96
DDX41-211ENST00000510171 MEX3DQ86XN8 651 aaKnown RBP9.05□□□□□ -0.96
DDX41-211ENST00000510171 ANKRD42Q8N9B4 389 aa9.05□□□□□ -0.96
DDX41-211ENST00000510171 GLB1L3Q8NCI6 653 aaPredicted RBP9.05□□□□□ -0.96
DDX41-211ENST00000510171 OR4F15Q8NGB8 312 aa9.05□□□□□ -0.96
DDX41-211ENST00000510171 OR1K1Q8NGR3 316 aa9.05□□□□□ -0.96
DDX41-211ENST00000510171 NEU4Q8WWR8 484 aaPredicted RBP9.05□□□□□ -0.96
DDX41-211ENST00000510171 PANX1Q96RD7 426 aa9.05□□□□□ -0.96
DDX41-211ENST00000510171 ZBTB18Q99592 522 aa9.05□□□□□ -0.96
DDX41-211ENST00000510171 SLC35A5Q9BS91 424 aa9.05□□□□□ -0.96
DDX41-211ENST00000510171 PLA2G12AQ9BZM1 189 aa9.05□□□□□ -0.96
DDX41-211ENST00000510171 MOV10Q9HCE1 1003 aaKnown RBP9.05□□□□□ -0.96
DDX41-211ENST00000510171 AIG1Q9NVV5 245 aa9.05□□□□□ -0.96
DDX41-211ENST00000510171 NKIRAS1Q9NYS0 192 aa9.05□□□□□ -0.96
DDX41-211ENST00000510171 PCDHB14Q9Y5E9 798 aa9.05□□□□□ -0.96
DDX41-211ENST00000510171 NUP214P35658 2090 aaPredicted RBP9.04□□□□□ -0.96
DDX41-211ENST00000510171 ARPC4-TTLL3A0A0A6YYG9 625 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 CFAP73A6NFT4 308 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 CCDC154A6NI56 674 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 AGAP5A6NIR3 686 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 OR6C65A6NJZ3 312 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 LIPT2A6NK58 231 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 hCG_2039718K7EN88 272 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 NR5A2O00482 541 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 FAAHO00519 579 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 SDHDO14521 159 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 LILRA1O75019 489 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 SNNO75324 88 aaPredicted RBP9.04□□□□□ -0.96
DDX41-211ENST00000510171 ALDOCP09972 364 aaKnown RBP9.04□□□□□ -0.96
DDX41-211ENST00000510171 CECR9P0C854 216 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 IDO1P14902 403 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 CXCR1P25024 350 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 IL2RGP31785 369 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 WDR4P57081 412 aaKnown RBP9.04□□□□□ -0.96
DDX41-211ENST00000510171 GNA13Q14344 377 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 GSTA3Q16772 222 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 C3orf36Q3SXR2 165 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 FAM169BQ8N8A8 192 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 MAGEE2Q8TD90 523 aaPredicted RBP9.04□□□□□ -0.96
DDX41-211ENST00000510171 BCL2L2Q92843 193 aaPredicted RBP9.04□□□□□ -0.96
DDX41-211ENST00000510171 ZNF317Q96PQ6 595 aaPredicted RBP9.04□□□□□ -0.96
DDX41-211ENST00000510171 TRNT1Q96Q11 434 aaKnown RBP9.04□□□□□ -0.96
DDX41-211ENST00000510171 OR52E6Q96RD3 313 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 DOK1Q99704 481 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 ADAM19Q9H013 955 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 OCEL1Q9H607 264 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 MTHFD2LQ9H903 347 aaPredicted RBP9.04□□□□□ -0.96
DDX41-211ENST00000510171 CRNNQ9UBG3 495 aaPredicted RBP9.04□□□□□ -0.96
DDX41-211ENST00000510171 METRNQ9UJH8 293 aa9.04□□□□□ -0.96
DDX41-211ENST00000510171 A0A096LPE4 126 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 A0A0A6YYJ9 748 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 A0A1W2PPZ6 126 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 SH3PXD2BA1X283 911 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 PRAMEF27A3QJZ7 478 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 AQP7P3A6NL99 342 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 HMGN4O00479 90 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 VAMP5O95183 116 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 KRT75O95678 551 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 IGLV1-44P01699 117 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 IL6P05231 212 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 HOXB1P14653 301 aaPredicted RBP9.03□□□□□ -0.96
DDX41-211ENST00000510171 IFNGR1P15260 489 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 IL7RP16871 459 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 NPR2P20594 1047 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 PCMT1P22061 227 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 CFPP27918 469 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 EPHA3P29320 983 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 CALCRP30988 508 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 THBS4P35443 961 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 SELENOPP49908 381 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 CDH15P55291 814 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 UFM1P61960 85 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 TUBA1BP68363 451 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 TUBA4AP68366 448 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 LGALS3BPQ08380 585 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 EPS8Q12929 822 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 SYPL1Q16563 259 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 CREB3L2Q70SY1 520 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 TUBA1AQ71U36 451 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 SPATA21Q7Z572 469 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 LSRQ86X29 649 aaPredicted RBP9.03□□□□□ -0.96
DDX41-211ENST00000510171 RNF130Q86XS8 419 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 ZNF440Q8IYI8 595 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 ZCCHC24Q8N2G6 241 aaKnown RBP9.03□□□□□ -0.96
DDX41-211ENST00000510171 ZNF786Q8N393 782 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.03□□□□□ -0.96
DDX41-211ENST00000510171 ANKFN1Q8N957 763 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 NUP37Q8NFH4 326 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 UBASH3BQ8TF42 649 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 WDR60Q8WVS4 1066 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 TEX37Q96LM6 180 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 ANKRD27Q96NW4 1050 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 SNX18Q96RF0 628 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 TAPBPLQ9BX59 468 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 SLC38A1Q9H2H9 487 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 WDR55Q9H6Y2 383 aaPredicted RBP9.03□□□□□ -0.96
DDX41-211ENST00000510171 ZNF442Q9H7R0 627 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 ADPRHL2Q9NX46 363 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 PRDM4Q9UKN5 801 aa9.03□□□□□ -0.96
DDX41-211ENST00000510171 GPR45Q9Y5Y3 372 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms