RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ZNF609O15014 1411 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 YEATS2Q9ULM3 1422 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 USP42Q9H9J4 1324 aaKnown RBP3.82□□□□□ -1.8
BRCA1-220ENST00000492859 MYH11P35749 1972 aa3.82□□□□□ -1.8
BRCA1-220ENST00000492859 GAPVD1Q14C86 1478 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 A0A1W2PPV9 198 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 TCRBV7S2A1N4TA0A589 114 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 SHISA7A6NL88 538 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 E9PLN8 166 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 K7EN84 100 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 CTSVO60911 334 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 UGT2B11O75310 529 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 SEMA7AO75326 666 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 BANF1O75531 89 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 HPP00738 406 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 JCHAINP01591 159 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 C9P02748 559 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 CSN3P07498 182 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 SFTPBP07988 381 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 C1GALT1C1LP0DN25 315 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 MYL2P10916 166 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF35P13682 527 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 CXCR1P25024 350 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 IVDP26440 423 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 NMBRP28336 390 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 CD200P41217 278 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 RPS9P46781 194 aaKnown RBP3.81□□□□□ -1.8
BRCA1-220ENST00000492859 LHX1P48742 406 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 RAB7AP51149 207 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 CAV2P51636 162 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 NUDT6P53370 316 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 UBE2MP61081 183 aaKnown RBP3.81□□□□□ -1.8
BRCA1-220ENST00000492859 RPS6P62753 249 aaKnown RBP3.81□□□□□ -1.8
BRCA1-220ENST00000492859 FKBP1BP68106 108 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 MS4A2Q01362 244 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 TLE3Q04726 772 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 RTP5Q14D33 572 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 MAPK14Q16539 360 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 HIST2H2ACQ16777 129 aaPredicted RBP3.81□□□□□ -1.8
BRCA1-220ENST00000492859 RFTN2Q52LD8 501 aaPredicted RBP3.81□□□□□ -1.8
BRCA1-220ENST00000492859 PPM1LQ5SGD2 360 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 STUMQ69YW2 141 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 UGT3A1Q6NUS8 523 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 PNCKQ6P2M8 343 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 DHRS13Q6UX07 377 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 COX15Q7KZN9 410 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 MEPCEQ7L2J0 689 aaKnown RBP3.81□□□□□ -1.8
BRCA1-220ENST00000492859 PRSS45Q7RTY3 260 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF605Q86T29 641 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 HAPLN4Q86UW8 402 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 TDHQ8IZJ6 230 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 IL22RA1Q8N6P7 574 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 OR1M1Q8NGA1 313 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 OR56A1Q8NGH5 318 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 OR6N2Q8NGY6 317 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 ASB10Q8WXI3 467 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 BAALCQ8WXS3 180 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 RORBQ92753 470 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 STMN2Q93045 179 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 ISL2Q96A47 359 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 RERGQ96A58 199 aaPredicted RBP3.81□□□□□ -1.8
BRCA1-220ENST00000492859 RPEQ96AT9 228 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 FAM136AQ96C01 138 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 FLYWCH2Q96CP2 140 aaKnown RBP3.81□□□□□ -1.8
BRCA1-220ENST00000492859 JSRP1Q96MG2 331 aaPredicted RBP3.81□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF599Q96NL3 588 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 DDOQ99489 341 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 FMO2Q99518 471 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 SEPHS2Q99611 448 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 PHB2Q99623 299 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 VKORC1Q9BQB6 163 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 NUDT9Q9BW91 350 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 HAPLN2Q9GZV7 340 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 NAA50Q9GZZ1 169 aaKnown RBP3.81□□□□□ -1.8
BRCA1-220ENST00000492859 MFSD1Q9H3U5 465 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 SEBOXQ9HB31 216 aaPredicted RBP3.81□□□□□ -1.8
BRCA1-220ENST00000492859 BPIFA1Q9NP55 256 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 AP5S1Q9NUS5 200 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 VPREB3Q9UKI3 123 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 MYRFQ9Y2G1 1151 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 COA3Q9Y2R0 106 aaPredicted RBP3.81□□□□□ -1.8
BRCA1-220ENST00000492859 POLDIP2Q9Y2S7 368 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 MTCH2Q9Y6C9 303 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 ABCB11O95342 1321 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 CCDC7Q96M83 1385 aa3.81□□□□□ -1.8
BRCA1-220ENST00000492859 ANKUB1A6NFN9 424 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 C2CD4BA6NLJ0 364 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 GJE1A6NN92 205 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 CENPXA8MT69 81 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 HACD1B0YJ81 288 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 CASKO14936 926 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 SLC31A1O15431 190 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 FGF16O43320 207 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 CHST10O43529 356 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 CUTAO60888 179 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 KHDRBS3O75525 346 aaKnown RBP3.8□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF205O95201 554 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 TMEM50AO95807 157 aa3.8□□□□□ -1.8
BRCA1-220ENST00000492859 OAS1P00973 400 aaKnown RBP3.8□□□□□ -1.8
BRCA1-220ENST00000492859 KLK1P06870 262 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms