RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 PPIL3Q9H2H8 161 aaKnown RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 OR51B6Q9H340 312 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 DUSP22Q9NRW4 184 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 PAK1IP1Q9NWT1 392 aaPredicted RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TAS2R3Q9NYW6 316 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 NDUFAF4Q9P032 175 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 SPG11Q96JI7 2443 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TRAV27A0A087WT01 109 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 IGHV3-15A0A0B4J1V0 119 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 LRRN3E7EW58 273 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 NUPL2O15504 423 aaKnown RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ZNHIT1O43257 154 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TLX2O43763 284 aaPredicted RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 SUSD5O60279 629 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 FMO6PO60774 539 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 CDRT1O95170 752 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 RENP00797 406 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ATP1B1P05026 303 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 STSP08842 583 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ANXA8P13928 327 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 PVALBP20472 110 aaPredicted RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 CD82P27701 267 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 CPOXP36551 454 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 MEOX1P50221 254 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 WNT3P56703 355 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 CLRN1P58418 232 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 RAB2AP61019 212 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 S100A12P80511 92 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 FGFBP1Q14512 234 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 EBPQ15125 230 aaKnown RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 INPP5JQ15735 1006 aaPredicted RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 C3AR1Q16581 482 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 IQCCQ4KMZ1 466 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 COQ5Q5HYK3 327 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 OGFRL1Q5TC84 451 aaPredicted RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 MDGA2Q7Z553 956 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF440Q8IYI8 595 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TOMM5Q8N4H5 51 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 IQCF1Q8N6M8 205 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 FDCSPQ8NFU4 85 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 OR5J2Q8NH18 312 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 DEDD2Q8WXF8 326 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 MAFIPQ8WZ33 124 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 RFT1Q96AA3 541 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 DDIT4LQ96D03 193 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 SGCZQ96LD1 299 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 PFDN5Q99471 154 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 BEX1Q9HBH7 125 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 DLL3Q9NYJ7 618 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TMEM181Q9P2C4 612 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ENPP4Q9Y6X5 453 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 COL6A3P12111 3177 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TRIOO75962 3097 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 FANCMQ8IYD8 2048 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TMED7-TICAM2A0A0A6YYA0 188 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 A0A1B0GWA3 101 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 A0A1W2PRQ8 180 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TCRBV16S1A1N1A0A5B0 115 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 C1QTNF9BB2RNN3 333 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 M0R036 132 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 PRRG2O14669 202 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 RCBTB2O95199 551 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 SNAP29O95721 258 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 PRH1P02810 166 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 MRPL3P09001 348 aaKnown RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 C1QTNF9P0C862 333 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 CCL3P10147 92 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ANXA3P12429 323 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 HSD17B1P14061 328 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 GPX2P18283 190 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ACVR2AP27037 513 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ELK4P28324 431 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 GRPRP30550 384 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 OPRL1P41146 370 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 MAP2K3P46734 347 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 EMDP50402 254 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TMPRSS3P57727 454 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 RAB5BP61020 215 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 POU3F1Q03052 451 aaPredicted RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 NPRL3Q12980 569 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 GINS1Q14691 196 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TSTQ16762 297 aaKnown RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF628Q5EBL2 1059 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 FAM76BQ5HYJ3 339 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TMEM201Q5SNT2 666 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 SAXO2Q658L1 398 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 EIF5AL1Q6IS14 154 aaKnown RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 FAM198BQ6UWH4 519 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF836Q6ZNA1 936 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 FAM220AQ7Z4H9 259 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ZAR1Q86SH2 424 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 LSRQ86X29 649 aaPredicted RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 SPACA3Q8IXA5 215 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 LILRA2Q8N149 483 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 METTL25Q8N6Q8 603 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 FAM86B1Q8N7N1 296 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 NAXEQ8NCW5 288 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 OR10H4Q8NGA5 316 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TMEM239Q8WW34 195 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 GATAD2BQ8WXI9 593 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms