RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 RINLQ6ZS11 566 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 C10orf53Q8N6V4 93 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 ZNF417Q8TAU3 575 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 PRRC1Q96M27 445 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 DACH2Q96NX9 599 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 ZNF587Q96SQ5 575 aaPredicted RBP14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 PRSS27Q9BQR3 290 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 ZNF426Q9BUY5 554 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 ASPNQ9BXN1 380 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 SLC19A3Q9BZV2 496 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 AMBRA1Q9C0C7 1298 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 GORASP2Q9H8Y8 452 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 DCAF13Q9NV06 445 aaKnown RBP14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 NDRG3Q9UGV2 375 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 PRSS50Q9UI38 385 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 SAMD4AQ9UPU9 718 aaKnown RBP14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 CORINQ9Y5Q5 1042 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 MPDZO75970 2070 aa14.43□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 NBPF19A0A087WUL8 3843 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 ARPC2O15144 300 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 MRPL33O75394 65 aaKnown RBP14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 THRBP10828 461 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 EPXP11678 715 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 EDNRAP25101 427 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 IFNA8P32881 189 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 TLE4Q04727 773 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 POU4F3Q15319 338 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 Q6ZT83 130 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 H1FNTQ75WM6 255 aaPredicted RBP14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 CXorf67Q86X51 503 aaPredicted RBP14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 GABRG1Q8N1C3 465 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 ARHGAP24Q8N264 748 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 ADPRHL1Q8NDY3 354 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 TMEM45BQ96B21 275 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 APH1AQ96BI3 265 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 MOGAT1Q96PD6 335 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 PARPBPQ9NWS1 579 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 SEC14L4Q9UDX3 406 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 A4GNTQ9UNA3 340 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 B3GALT5Q9Y2C3 310 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 TESMINQ9Y4I5 508 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 SNX13Q9Y5W8 968 aa14.42□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 KPNA4O00629 521 aaPredicted RBP14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 UBOX5O94941 541 aa14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 CNOT4O95628 575 aaKnown RBP14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 ADAP00813 363 aa14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 MT-ATP6P00846 226 aa14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 PSMB1P20618 241 aaKnown RBP14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 NTF4P34130 210 aa14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 MSX2P35548 267 aaPredicted RBP14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 RBM34P42696 430 aaKnown RBP14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 LTBQ06643 244 aa14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 ST3GAL3Q11203 375 aa14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 CREB3L2Q70SY1 520 aa14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 NKAIN4Q8IVV8 208 aa14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 ZIC4Q8N9L1 334 aa14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 SCAIQ8N9R8 606 aa14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 TMEM255BQ8WV15 326 aa14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 NSMCE2Q96MF7 247 aa14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 OXGR1Q96P68 337 aa14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 ZNF385AQ96PM9 386 aaKnown RBP14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 OR10A4Q9H209 315 aa14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 C1orf21Q9H246 121 aa14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 GPR52Q9Y2T5 361 aa14.41□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 ADGRG4Q8IZF6 3080 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 LRRN3E7EW58 273 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 J3KTA2 159 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 NQO1P15559 274 aaKnown RBP14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 YAP1P46937 504 aaKnown RBP14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 UGT2B15P54855 530 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 IL1RL1Q01638 556 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 PMS2P3Q13401 168 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 P2RY6Q15077 328 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 ZNF74Q16587 644 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 SFRP5Q5T4F7 317 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 FBXW9Q5XUX1 488 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 ANKRD34AQ69YU3 496 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 AAED1Q7RTV5 226 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 OFCC1Q8IZS5 231 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 UBE2J2Q8N2K1 259 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 KDM8Q8N371 416 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 TMEM239Q8WW34 195 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 HS6ST2Q96MM7 605 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 WFIKKN1Q96NZ8 548 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 MED18Q9BUE0 208 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 FNDC11Q9BVV2 318 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 HDHD5Q9BXW7 423 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 FKRPQ9H9S5 495 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 MCCC2Q9HCC0 563 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 MRPL39Q9NYK5 338 aaKnown RBP14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 B3GAT1Q9P2W7 334 aa14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 PRPF19Q9UMS4 504 aaKnown RBP14.4□□□□□ -0.1
MSH5-SAPCD1-206ENST00000491552 A6NNC1 897 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ENO4A6NNW6 628 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 CH25HO95992 272 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 IGHV3-9P01782 118 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 MT-ND1P03886 318 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 PPP3CBP16298 524 aa14.39□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ZNF43P17038 809 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms