RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 TRBV4-1A0A0J9YWV2 114 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 A0A1W2PRQ8 180 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 FAM221AA4D161 298 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 TRAPPC13A5PLN9 417 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 SHISA8B8ZZ34 492 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 EIF1AYO14602 144 aaKnown RBP9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 EFNA2O43921 213 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 TNFAIP8O95379 198 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 CST1P01037 141 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 PRKCAP17252 672 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 ELK4P28324 431 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 ADH6P28332 368 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 RRM2P31350 389 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 EIF1AXP47813 144 aaKnown RBP9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 SLC6A8P48029 635 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 IDH2P48735 452 aaKnown RBP9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 CHN2P52757 468 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 CDH12P55289 794 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 DGCR6Q14129 220 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 GK3PQ14409 553 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 PDK3Q15120 406 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 PON3Q15166 354 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 QPRTQ15274 297 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 SEC23BQ15437 767 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 RFX4Q33E94 735 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 PDSS1Q5T2R2 415 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 ZNF613Q6PF04 617 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 ESPNLQ6ZVH7 1005 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 PLEKHM3Q6ZWE6 761 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 ATG4DQ86TL0 474 aaPredicted RBP9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 RANBP3LQ86VV4 465 aaPredicted RBP9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 NKAIN4Q8IVV8 208 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 HS3ST5Q8IZT8 346 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 TMCO5AQ8N6Q1 288 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 CNEP1R1Q8N9A8 125 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 FNDC9Q8TBE3 224 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 STARD4Q96DR4 205 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 SLC41A3Q96GZ6 507 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 ZNF845Q96IR2 970 aaPredicted RBP9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 ZNF347Q96SE7 839 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 PRRG4Q9BZD6 226 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 TRIM2Q9C040 744 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 SEMA6AQ9H2E6 1030 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 CLEC4MQ9H2X3 399 aaPredicted RBP9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 COQ10BQ9H8M1 238 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 NMNAT1Q9HAN9 279 aaPredicted RBP9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 NDUFA13Q9P0J0 144 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 SLC13A4Q9UKG4 626 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 ITGB1BP2Q9UKP3 347 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 MCTS1Q9ULC4 181 aaKnown RBP9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 EDARQ9UNE0 448 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 TESMINQ9Y4I5 508 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 MAGED1Q9Y5V3 778 aaPredicted RBP9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 DOCK7Q96N67 2140 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 DCHS2Q6V1P9 2916 aa9.44□□□□□ -0.9
SCAMP4-208ENST00000489554 CSMD2Q7Z408 3487 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 POLQO75417 2590 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 IGKV1D-42A0A075B6H8 117 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 ADAMDEC1O15204 470 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 SMNDC1O75940 238 aaKnown RBP eCLIP9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 NUDT14O95848 222 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 HPRP00739 348 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 THRBP10828 461 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 CD8BP10966 210 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 ITGA2P17301 1181 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 PGCP20142 388 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 SLC1A3P43003 542 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 KIR2DL2P43627 348 aaPredicted RBP9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 CCR4P51679 360 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 RPS6KA3P51812 740 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 FOXF1Q12946 379 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 CBFBQ13951 182 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 LAPTM4AQ15012 233 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 ANKRD34AQ69YU3 496 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 WBP2NLQ6ICG8 309 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 ZNF770Q6IQ21 691 aaPredicted RBP9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 KRT80Q6KB66 452 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 TMEM154Q6P9G4 183 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 TBPL2Q6SJ96 375 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 HIPK1Q86Z02 1210 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 ZDHHC13Q8IUH4 622 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 GALNT4Q8N4A0 578 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 OR10D3Q8NH80 312 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 OR2V1Q8NHB1 315 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 LINC01560Q8TB33 94 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 SLC7A13Q8TCU3 470 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 ST8SIA1Q92185 356 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 NINJ1Q92982 152 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 SLC38A4Q969I6 547 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 ADGRG7Q96K78 797 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 DACH2Q96NX9 599 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 ELOVL5Q9NYP7 299 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 NDRG3Q9UGV2 375 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 OSGIN1Q9UJX0 560 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 SLC7A7Q9UM01 511 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 ORC6Q9Y5N6 252 aa9.43□□□□□ -0.9
SCAMP4-208ENST00000489554 CCDC168Q8NDH2 2452 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 A0A087WUU8 490 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 SH3D21A4FU49 640 aa9.42□□□□□ -0.9
SCAMP4-208ENST00000489554 GJE1A6NN92 205 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms