RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 UBQLN4Q9NRR5 601 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 ZNF275Q9NSD4 429 aaPredicted RBP23.87■■□□□ 1.41
HLA-C-208ENST00000487245 GMEB2Q9UKD1 530 aa23.87■■□□□ 1.41
HLA-C-208ENST00000487245 MRPS17Q9Y2R5 130 aaKnown RBP23.87■■□□□ 1.41
HLA-C-208ENST00000487245 C17orf105B2RV13 164 aa23.86■■□□□ 1.41
HLA-C-208ENST00000487245 PNMTP11086 282 aa23.86■■□□□ 1.41
HLA-C-208ENST00000487245 PPICP45877 212 aa23.86■■□□□ 1.41
HLA-C-208ENST00000487245 GALK2Q01415 458 aa23.86■■□□□ 1.41
HLA-C-208ENST00000487245 NNATQ16517 81 aa23.86■■□□□ 1.41
HLA-C-208ENST00000487245 SNAP47Q5SQN1 464 aa23.86■■□□□ 1.41
HLA-C-208ENST00000487245 WBP2NLQ6ICG8 309 aa23.86■■□□□ 1.41
HLA-C-208ENST00000487245 CARFQ8N187 725 aa23.86■■□□□ 1.41
HLA-C-208ENST00000487245 FAM71CQ8NEG0 241 aa23.86■■□□□ 1.41
HLA-C-208ENST00000487245 C3orf49Q96BT1 292 aa23.86■■□□□ 1.41
HLA-C-208ENST00000487245 HYLS1Q96M11 299 aa23.86■■□□□ 1.41
HLA-C-208ENST00000487245 SLC46A1Q96NT5 459 aa23.86■■□□□ 1.41
HLA-C-208ENST00000487245 GFM1Q96RP9 751 aaKnown RBP23.86■■□□□ 1.41
HLA-C-208ENST00000487245 GHITMQ9H3K2 345 aa23.86■■□□□ 1.41
HLA-C-208ENST00000487245 SPATA2Q9UM82 520 aa23.86■■□□□ 1.41
HLA-C-208ENST00000487245 TMEM184BQ9Y519 407 aaPredicted RBP23.86■■□□□ 1.41
HLA-C-208ENST00000487245 A0A0A6YYJ9 748 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 RHPN2P1A8MT19 583 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 TMEM150CB9EJG8 249 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 ZNF24P17028 368 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 RAG2P55895 527 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 PRPS1P60891 318 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 RPS4XP62701 263 aaKnown RBP23.85■■□□□ 1.41
HLA-C-208ENST00000487245 CCDC85BQ15834 202 aaPredicted RBP23.85■■□□□ 1.41
HLA-C-208ENST00000487245 METTL27Q8N6F8 245 aaPredicted RBP23.85■■□□□ 1.41
HLA-C-208ENST00000487245 NPEPL1Q8NDH3 523 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 NRIP3Q9NQ35 241 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 EXOSC3Q9NQT5 275 aaKnown RBP23.85■■□□□ 1.41
HLA-C-208ENST00000487245 NCDNQ9UBB6 729 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 MRTO4Q9UKD2 239 aaKnown RBP23.85■■□□□ 1.41
HLA-C-208ENST00000487245 OR2W5A6NFC9 320 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 IL33O95760 270 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 EVI2BP34910 448 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 RPL4P36578 427 aaKnown RBP23.85■■□□□ 1.41
HLA-C-208ENST00000487245 LAMTOR1Q6IAA8 161 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 CREB3L2Q70SY1 520 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 MVB12AQ96EY5 273 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 OR1F2PQ96R84 312 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 LANCL2Q9NS86 450 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 CUTCQ9NTM9 273 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 RANBP2P49792 3224 aaKnown RBP23.85■■□□□ 1.41
HLA-C-208ENST00000487245 THADAQ6YHU6 1953 aa23.85■■□□□ 1.41
HLA-C-208ENST00000487245 AGRPO00253 132 aa23.84■■□□□ 1.41
HLA-C-208ENST00000487245 GNB5O14775 395 aa23.84■■□□□ 1.41
HLA-C-208ENST00000487245 HPGDP15428 266 aa23.84■■□□□ 1.41
HLA-C-208ENST00000487245 HCCSP53701 268 aa23.84■■□□□ 1.41
HLA-C-208ENST00000487245 NDUFAF6Q330K2 333 aa23.84■■□□□ 1.41
HLA-C-208ENST00000487245 C1QTNF12Q5T7M4 302 aa23.84■■□□□ 1.41
HLA-C-208ENST00000487245 SNX33Q8WV41 574 aa23.84■■□□□ 1.41
HLA-C-208ENST00000487245 DEDD2Q8WXF8 326 aa23.84■■□□□ 1.41
HLA-C-208ENST00000487245 OR2M2Q96R28 347 aa23.84■■□□□ 1.41
HLA-C-208ENST00000487245 YIPF2Q9BWQ6 316 aa23.84■■□□□ 1.41
HLA-C-208ENST00000487245 EMC7Q9NPA0 242 aa23.84■■□□□ 1.41
HLA-C-208ENST00000487245 CA14Q9ULX7 337 aa23.84■■□□□ 1.41
HLA-C-208ENST00000487245 LRRN3E7EW58 273 aa23.83■■□□□ 1.41
HLA-C-208ENST00000487245 CPNE3O75131 537 aaKnown RBP23.83■■□□□ 1.41
HLA-C-208ENST00000487245 RORAP35398 523 aa23.83■■□□□ 1.41
HLA-C-208ENST00000487245 DEFB133Q30KQ1 61 aa23.83■■□□□ 1.41
HLA-C-208ENST00000487245 FNDC7Q5VTL7 733 aa23.83■■□□□ 1.41
HLA-C-208ENST00000487245 ZNF767PQ75MW2 155 aa23.83■■□□□ 1.41
HLA-C-208ENST00000487245 TOMM5Q8N4H5 51 aa23.83■■□□□ 1.41
HLA-C-208ENST00000487245 ZSCAN1Q8NBB4 408 aa23.83■■□□□ 1.41
HLA-C-208ENST00000487245 HSD17B8Q92506 261 aa23.83■■□□□ 1.41
HLA-C-208ENST00000487245 MED28Q9H204 178 aa23.83■■□□□ 1.41
HLA-C-208ENST00000487245 LRRN3Q9H3W5 708 aa23.83■■□□□ 1.41
HLA-C-208ENST00000487245 TEKT2Q9UIF3 430 aa23.83■■□□□ 1.41
HLA-C-208ENST00000487245 A0A1B0GVC2 190 aa23.83■■□□□ 1.4
HLA-C-208ENST00000487245 A6NIN4 97 aa23.83■■□□□ 1.4
HLA-C-208ENST00000487245 ELOA3DA6NLF2 546 aaPredicted RBP23.83■■□□□ 1.4
HLA-C-208ENST00000487245 OR2B3O76000 313 aa23.83■■□□□ 1.4
HLA-C-208ENST00000487245 PRKCAP17252 672 aa23.83■■□□□ 1.4
HLA-C-208ENST00000487245 SPI1P17947 270 aa23.83■■□□□ 1.4
HLA-C-208ENST00000487245 LCN1P31025 176 aa23.83■■□□□ 1.4
HLA-C-208ENST00000487245 NXPH1P58417 271 aa23.83■■□□□ 1.4
HLA-C-208ENST00000487245 BTBD16Q32M84 506 aa23.83■■□□□ 1.4
HLA-C-208ENST00000487245 ELOA3BQ3SY89 546 aa23.83■■□□□ 1.4
HLA-C-208ENST00000487245 CDH24Q86UP0 819 aa23.83■■□□□ 1.4
HLA-C-208ENST00000487245 TMEM151BQ8IW70 566 aa23.83■■□□□ 1.4
HLA-C-208ENST00000487245 DTX3Q8N9I9 347 aa23.83■■□□□ 1.4
HLA-C-208ENST00000487245 ELOA3Q8NG57 546 aa23.83■■□□□ 1.4
HLA-C-208ENST00000487245 PTPMT1Q8WUK0 201 aaPredicted RBP23.83■■□□□ 1.4
HLA-C-208ENST00000487245 PCDHGA9Q9Y5G4 932 aaKnown RBP23.83■■□□□ 1.4
HLA-C-208ENST00000487245 TRBV2A0A0J9YWF9 115 aa23.82■■□□□ 1.4
HLA-C-208ENST00000487245 ZNF879B4DU55 563 aa23.82■■□□□ 1.4
HLA-C-208ENST00000487245 SCDO00767 359 aa23.82■■□□□ 1.4
HLA-C-208ENST00000487245 TCRBP04435 133 aa23.82■■□□□ 1.4
HLA-C-208ENST00000487245 UBL4AP11441 157 aa23.82■■□□□ 1.4
HLA-C-208ENST00000487245 SNRPBP14678 240 aaKnown RBP23.82■■□□□ 1.4
HLA-C-208ENST00000487245 EDNRAP25101 427 aa23.82■■□□□ 1.4
HLA-C-208ENST00000487245 MAOBP27338 520 aa23.82■■□□□ 1.4
HLA-C-208ENST00000487245 GRK6P43250 576 aa23.82■■□□□ 1.4
HLA-C-208ENST00000487245 SLC37A1P57057 533 aa23.82■■□□□ 1.4
HLA-C-208ENST00000487245 DYRK1AQ13627 763 aa23.82■■□□□ 1.4
HLA-C-208ENST00000487245 CD276Q5ZPR3 534 aa23.82■■□□□ 1.4
HLA-C-208ENST00000487245 LIPHQ8WWY8 451 aa23.82■■□□□ 1.4
HLA-C-208ENST00000487245 ADAMTS14Q8WXS8 1223 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms