RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 HDHD5Q9BXW7 423 aa15.77■□□□□ 0.12
SREBF1-213ENST00000485080 C1orf21Q9H246 121 aa15.77■□□□□ 0.12
SREBF1-213ENST00000485080 C12orf49Q9H741 205 aa15.77■□□□□ 0.12
SREBF1-213ENST00000485080 DCAF13Q9NV06 445 aaKnown RBP15.77■□□□□ 0.12
SREBF1-213ENST00000485080 PARPBPQ9NWS1 579 aa15.77■□□□□ 0.12
SREBF1-213ENST00000485080 NDRG3Q9UGV2 375 aa15.77■□□□□ 0.12
SREBF1-213ENST00000485080 MT-ATP6P00846 226 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 SERPINA1P01009 418 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 PPP3CBP16298 524 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 TNFRSF1BP20333 461 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 NTF4P34130 210 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 RBM34P42696 430 aaKnown RBP15.76■□□□□ 0.11
SREBF1-213ENST00000485080 OR1E2P47887 323 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 STAC2Q6ZMT1 411 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 Q6ZT83 130 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 TRPM8Q7Z2W7 1104 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 RBM15BQ8NDT2 890 aaKnown RBP15.76■□□□□ 0.11
SREBF1-213ENST00000485080 OR9K2Q8NGE7 335 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 USB1Q9BQ65 265 aaKnown RBP15.76■□□□□ 0.11
SREBF1-213ENST00000485080 MCCC2Q9HCC0 563 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 MAGEL2Q9UJ55 1249 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 RIMS3Q9UJD0 308 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 RPS6KA6Q9UK32 745 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 SLC7A7Q9UM01 511 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 GPR52Q9Y2T5 361 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 NOSIPQ9Y314 301 aaKnown RBP15.76■□□□□ 0.11
SREBF1-213ENST00000485080 TESMINQ9Y4I5 508 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 AKAP6Q13023 2319 aa15.76■□□□□ 0.11
SREBF1-213ENST00000485080 HTR3EA5X5Y0 456 aa15.75■□□□□ 0.11
SREBF1-213ENST00000485080 GMNNO75496 209 aa15.75■□□□□ 0.11
SREBF1-213ENST00000485080 BGLAPP02818 100 aa15.75■□□□□ 0.11
SREBF1-213ENST00000485080 IFNW1P05000 195 aa15.75■□□□□ 0.11
SREBF1-213ENST00000485080 CCKARP32238 428 aa15.75■□□□□ 0.11
SREBF1-213ENST00000485080 TAS2R41P59536 307 aa15.75■□□□□ 0.11
SREBF1-213ENST00000485080 LTBQ06643 244 aa15.75■□□□□ 0.11
SREBF1-213ENST00000485080 IFI44LQ53G44 452 aa15.75■□□□□ 0.11
SREBF1-213ENST00000485080 TMEM225Q6GV28 225 aa15.75■□□□□ 0.11
SREBF1-213ENST00000485080 H1FNTQ75WM6 255 aaPredicted RBP15.75■□□□□ 0.11
SREBF1-213ENST00000485080 VTCN1Q7Z7D3 282 aa15.75■□□□□ 0.11
SREBF1-213ENST00000485080 LSRQ86X29 649 aaPredicted RBP15.75■□□□□ 0.11
SREBF1-213ENST00000485080 RNF148Q8N7C7 305 aa15.75■□□□□ 0.11
SREBF1-213ENST00000485080 ZIC4Q8N9L1 334 aa15.75■□□□□ 0.11
SREBF1-213ENST00000485080 FAM162AQ96A26 154 aa15.75■□□□□ 0.11
SREBF1-213ENST00000485080 PRRC1Q96M27 445 aa15.75■□□□□ 0.11
SREBF1-213ENST00000485080 MRPL39Q9NYK5 338 aaKnown RBP15.75■□□□□ 0.11
SREBF1-213ENST00000485080 EGFL7Q9UHF1 273 aa15.75■□□□□ 0.11
SREBF1-213ENST00000485080 A4GNTQ9UNA3 340 aa15.75■□□□□ 0.11
SREBF1-213ENST00000485080 SAMD4AQ9UPU9 718 aaKnown RBP15.75■□□□□ 0.11
SREBF1-213ENST00000485080 SH3D21A4FU49 640 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 CYSRT1A8MQ03 144 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 MRPL33O75394 65 aaKnown RBP15.74■□□□□ 0.11
SREBF1-213ENST00000485080 ZNF682O95780 498 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 NCK1P16333 377 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 GTF2E2P29084 291 aaKnown RBP15.74■□□□□ 0.11
SREBF1-213ENST00000485080 GRPRP30550 384 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 IFNA8P32881 189 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 MXRA7P84157 204 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 PIN1Q13526 163 aaPredicted RBP15.74■□□□□ 0.11
SREBF1-213ENST00000485080 EXOC3L2Q2M3D2 409 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 TTC33Q6PID6 262 aaPredicted RBP15.74■□□□□ 0.11
SREBF1-213ENST00000485080 DEF8Q6ZN54 512 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 CREB3L2Q70SY1 520 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 P3H2Q8IVL5 708 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 LINC01560Q8TB33 94 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 RNF217Q8TC41 542 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 APH1AQ96BI3 265 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 ZNF775Q96BV0 537 aaPredicted RBP15.74■□□□□ 0.11
SREBF1-213ENST00000485080 SLC25A36Q96CQ1 311 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 HSH2DQ96JZ2 352 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 HS6ST2Q96MM7 605 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 AMBRA1Q9C0C7 1298 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 B3GAT1Q9P2W7 334 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 MALT1Q9UDY8 824 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 SNX13Q9Y5W8 968 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 PRR14LQ5THK1 2151 aa15.74■□□□□ 0.11
SREBF1-213ENST00000485080 HRNRQ86YZ3 2850 aaPredicted RBP15.74■□□□□ 0.11
SREBF1-213ENST00000485080 CSMD2Q7Z408 3487 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 CREBBPQ92793 2442 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 M0R082 166 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 COX5AP20674 150 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 EDNRAP25101 427 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 TLE4Q04727 773 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 ST3GAL3Q11203 375 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 ITGADQ13349 1161 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 SNTB1Q13884 538 aaKnown RBP15.73■□□□□ 0.11
SREBF1-213ENST00000485080 ZNF74Q16587 644 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 SFRP5Q5T4F7 317 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 FBXW9Q5XUX1 488 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 EPHX4Q8IUS5 362 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 ZNF100Q8IYN0 542 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 OFCC1Q8IZS5 231 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 FAM156AQ8NDB6 213 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 STEAP2Q8NFT2 490 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 ZNF417Q8TAU3 575 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 WFIKKN1Q96NZ8 548 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 OXGR1Q96P68 337 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 ZNF587Q96SQ5 575 aaPredicted RBP15.73■□□□□ 0.11
SREBF1-213ENST00000485080 KLHL4Q9C0H6 718 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 FKRPQ9H9S5 495 aa15.73■□□□□ 0.11
SREBF1-213ENST00000485080 TAS2R1Q9NYW7 299 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms