RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 C19orf84I3L1E1 186 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 M0R082 166 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 EBAG9O00559 213 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 GSC2O15499 205 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 VAMP5O95183 116 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 CH25HO95992 272 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 MT-ATP6P00846 226 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 CGAP01215 116 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 FABP3P05413 133 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 UMPSP11172 480 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 RHCEP18577 417 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 COL8A1P27658 744 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 SLC16A1P53985 500 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 VLDLRP98155 873 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 TRAP1Q12931 704 aaKnown RBP11.04□□□□□ -0.64
DDX56-209ENST00000473924 SLC17A1Q14916 467 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 TRAM2Q15035 370 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 EXOC3L2Q2M3D2 409 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 FBXL19-AS1Q494R0 122 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 H1FNTQ75WM6 255 aaPredicted RBP11.04□□□□□ -0.64
DDX56-209ENST00000473924 RRM2BQ7LG56 351 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 NUFIP2Q7Z417 695 aaKnown RBP11.04□□□□□ -0.64
DDX56-209ENST00000473924 ZNF100Q8IYN0 542 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 ZNF417Q8TAU3 575 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 POP5Q969H6 163 aaKnown RBP11.04□□□□□ -0.64
DDX56-209ENST00000473924 ZNF587Q96SQ5 575 aaPredicted RBP11.04□□□□□ -0.64
DDX56-209ENST00000473924 SEPHS2Q99611 448 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 ZNF426Q9BUY5 554 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 SF3B5Q9BWJ5 86 aaKnown RBP11.04□□□□□ -0.64
DDX56-209ENST00000473924 FANCFQ9NPI8 374 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 NDUFAF4Q9P032 175 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 ING1Q9UK53 422 aaPredicted RBP11.04□□□□□ -0.64
DDX56-209ENST00000473924 RASD1Q9Y272 281 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 B3GALT5Q9Y2C3 310 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 CORINQ9Y5Q5 1042 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 CACNA1CQ13936 2221 aa11.04□□□□□ -0.64
DDX56-209ENST00000473924 USP9YO00507 2555 aaPredicted RBP11.03□□□□□ -0.64
DDX56-209ENST00000473924 ENO4A6NNW6 628 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 LRRN3E7EW58 273 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 FFAR1O14842 300 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 MRPL33O75394 65 aaKnown RBP11.03□□□□□ -0.64
DDX56-209ENST00000473924 DIRAS1O95057 198 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 OR6A2O95222 327 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 BGLAPP02818 100 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 MT-ND1P03886 318 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 HIST1H2ABP04908 130 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 UGT2B15P54855 530 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 LTBQ06643 244 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 PMS2P3Q13401 168 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 C1DQ13901 141 aaKnown RBP11.03□□□□□ -0.64
DDX56-209ENST00000473924 FLOT2Q14254 428 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 MEX3BQ6ZN04 569 aaKnown RBP11.03□□□□□ -0.64
DDX56-209ENST00000473924 BEND4Q6ZU67 534 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 HIST3H2AQ7L7L0 130 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 KIF18BQ86Y91 864 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 ZDHHC21Q8IVQ6 265 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 OR9K2Q8NGE7 335 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 PFN4Q8NHR9 129 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 HIST1H2ACQ93077 130 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 C7orf34Q96L11 122 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 MOGAT1Q96PD6 335 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 PIP5K1AQ99755 562 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 CADM1Q9BY67 442 aaKnown RBP11.03□□□□□ -0.64
DDX56-209ENST00000473924 FKRPQ9H9S5 495 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 NMNAT1Q9HAN9 279 aaPredicted RBP11.03□□□□□ -0.64
DDX56-209ENST00000473924 MEPEQ9NQ76 525 aaPredicted RBP11.03□□□□□ -0.64
DDX56-209ENST00000473924 NPDC1Q9NQX5 325 aaPredicted RBP11.03□□□□□ -0.64
DDX56-209ENST00000473924 NANSQ9NR45 359 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 PARPBPQ9NWS1 579 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 GALNT8Q9NY28 637 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 SEC14L4Q9UDX3 406 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 FLVCR1Q9Y5Y0 555 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 ICE1Q9Y2F5 2266 aa11.03□□□□□ -0.64
DDX56-209ENST00000473924 COL12A1Q99715 3063 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 TCRBV5S2A0A599 114 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 ACOT8O14734 319 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 SEMG1P04279 462 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 H1F0P07305 194 aaKnown RBP11.02□□□□□ -0.65
DDX56-209ENST00000473924 COX6B1P14854 86 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 POU2F1P14859 743 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 ZNF43P17038 809 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 AHCYP23526 432 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 CD79BP40259 229 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 PEX19P40855 299 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 P2RY4P51582 365 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 SMIM11AP58511 58 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 SPIBQ01892 262 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 CHRNB3Q05901 458 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 ZNF74Q16587 644 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 FAM98BQ52LJ0 330 aaKnown RBP11.02□□□□□ -0.65
DDX56-209ENST00000473924 FGD3Q5JSP0 725 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 PGM2L1Q6PCE3 622 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 ZNF474Q6S9Z5 364 aaPredicted RBP11.02□□□□□ -0.65
DDX56-209ENST00000473924 CASP12Q6UXS9 341 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 ZNF730Q6ZMV8 503 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.02□□□□□ -0.65
DDX56-209ENST00000473924 TSEN54Q7Z6J9 526 aaKnown RBP11.02□□□□□ -0.65
DDX56-209ENST00000473924 UBE2J2Q8N2K1 259 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 KDM8Q8N371 416 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 SCAIQ8N9R8 606 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms